y
Basic Information | |
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Species | Prunus persica |
Cazyme ID | ppa026550m |
Family | CE8 |
Protein Properties | Length: 372 Molecular Weight: 40525 Isoelectric Point: 8.3217 |
Chromosome | Chromosome/Scaffold: 6 Start: 9899074 End: 9900682 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 73 | 358 | 0 |
VKVMKDGSGEFKTITDAVNSIPADNTKRVIVYIGGGEYNEKITIPRNKPFVTFYGSPTNMPTLTFSSGAPKYGTMDSATVIAESDYFVAVNLIIKNSSPK PARNSVGQQALALRVSGTKSALFNCRLIGFQDTLCDDKGNHFFKDCFIEGTVDFIFGSGKSLYLNTELHVLGDNEMTVITAQARDSASEDTGYSFVHCNI TGTGNGTYLGRAWRISPRVVFAYTGMSEVITPAGWNNKNRPERDSTVFYGEYKCSGPGSNMVGRVKYAKQLNEEQIKPFLNLGYIQ |
Full Sequence |
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Protein Sequence Length: 372 Download |
MARKNTCLDV HAALIVTLIL LTAAIAVAND DTPVPADYSQ VNTWFNNNVK SYKERQGTLD 60 PALVTAEVGQ TVVKVMKDGS GEFKTITDAV NSIPADNTKR VIVYIGGGEY NEKITIPRNK 120 PFVTFYGSPT NMPTLTFSSG APKYGTMDSA TVIAESDYFV AVNLIIKNSS PKPARNSVGQ 180 QALALRVSGT KSALFNCRLI GFQDTLCDDK GNHFFKDCFI EGTVDFIFGS GKSLYLNTEL 240 HVLGDNEMTV ITAQARDSAS EDTGYSFVHC NITGTGNGTY LGRAWRISPR VVFAYTGMSE 300 VITPAGWNNK NRPERDSTVF YGEYKCSGPG SNMVGRVKYA KQLNEEQIKP FLNLGYIQGS 360 KWLLPPPNPK V* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02671 | PLN02671 | 2.0e-84 | 69 | 363 | 304 | + pectinesterase | ||
PLN02432 | PLN02432 | 2.0e-90 | 70 | 363 | 294 | + putative pectinesterase | ||
PLN02304 | PLN02304 | 6.0e-94 | 75 | 365 | 299 | + probable pectinesterase | ||
PLN02682 | PLN02682 | 2.0e-109 | 71 | 365 | 302 | + pectinesterase family protein | ||
PLN02665 | PLN02665 | 0 | 29 | 368 | 340 | + pectinesterase family protein |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI38547.1 | 0 | 10 | 367 | 6 | 363 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002309337.1 | 0 | 16 | 368 | 15 | 368 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002318197.1 | 0 | 16 | 368 | 11 | 364 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321778.1 | 0 | 18 | 368 | 14 | 362 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002333446.1 | 0 | 16 | 368 | 12 | 365 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 8.99634e-43 | 65 | 363 | 2 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 4.00001e-40 | 75 | 363 | 7 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 2e-21 | 72 | 240 | 8 | 190 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 2e-21 | 72 | 240 | 8 | 190 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 2e-21 | 72 | 240 | 8 | 190 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |