y
Basic Information | |
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Species | Phaseolus vulgaris |
Cazyme ID | Phvul.007G212000.1 |
Family | CE8 |
Protein Properties | Length: 371 Molecular Weight: 41019.5 Isoelectric Point: 9.5337 |
Chromosome | Chromosome/Scaffold: 07 Start: 45075831 End: 45081093 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 73 | 363 | 0 |
ITVSQDGSADFKTISEALNSIPPRNTMRVIVSISPGVYREKVMIPRTMPFITLSGEAGNPPTITGNDTASASKRNGTPLGTFHSATVAVDASYFVAINIK FENSAPHEIGRRGEQGVALRISGTKAAFYNCSFNGAQDTLYDHKGLHFFHNCSIQGSVDFIFGYARSLYQNCYLNSTTKKVASITAQKRTNSSLDSGFSF QNCTVTGSGKVYLGRAWGDYSRVVFSYTYMDNLVLPKGWSDWGDQKRDSRVYYGEYMCSGPGANMAGRVPWARVLTDEEAKPFIGTQFIEG |
Full Sequence |
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Protein Sequence Length: 371 Download |
MVSKTHFQLI VLLVFLLSSL NITSSSYAQS VANFDKWVSC NMKKYDERKN ILKSKWKVAD 60 LKLRQAESNK VIITVSQDGS ADFKTISEAL NSIPPRNTMR VIVSISPGVY REKVMIPRTM 120 PFITLSGEAG NPPTITGNDT ASASKRNGTP LGTFHSATVA VDASYFVAIN IKFENSAPHE 180 IGRRGEQGVA LRISGTKAAF YNCSFNGAQD TLYDHKGLHF FHNCSIQGSV DFIFGYARSL 240 YQNCYLNSTT KKVASITAQK RTNSSLDSGF SFQNCTVTGS GKVYLGRAWG DYSRVVFSYT 300 YMDNLVLPKG WSDWGDQKRD SRVYYGEYMC SGPGANMAGR VPWARVLTDE EAKPFIGTQF 360 IEGDTWLISP * 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02304 | PLN02304 | 9.0e-104 | 72 | 367 | 305 | + probable pectinesterase | ||
PLN02432 | PLN02432 | 3.0e-104 | 68 | 367 | 300 | + putative pectinesterase | ||
PLN02671 | PLN02671 | 3.0e-112 | 72 | 367 | 298 | + pectinesterase | ||
PLN02665 | PLN02665 | 6.0e-139 | 35 | 370 | 339 | + pectinesterase family protein | ||
PLN02682 | PLN02682 | 1.0e-142 | 73 | 367 | 297 | + pectinesterase family protein |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN79461.1 | 0 | 1 | 370 | 1 | 381 | hypothetical protein [Vitis vinifera] |
GenBank | EEC69509.1 | 0 | 33 | 370 | 69 | 411 | hypothetical protein OsI_38743 [Oryza sativa Indica Group] |
RefSeq | NP_001067039.1 | 0 | 33 | 370 | 68 | 410 | Os12g0563700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002320279.1 | 0 | 81 | 367 | 1 | 287 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002443368.1 | 0 | 30 | 370 | 75 | 428 | hypothetical protein SORBIDRAFT_08g018360 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 73 | 367 | 9 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 75 | 369 | 7 | 306 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 5e-22 | 69 | 361 | 5 | 334 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 5e-22 | 69 | 361 | 5 | 334 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 5e-22 | 69 | 361 | 5 | 334 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |