y
Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10030015m |
Family | CE8 |
Protein Properties | Length: 322 Molecular Weight: 35047.4 Isoelectric Point: 8.7161 |
Chromosome | Chromosome/Scaffold: 8 Start: 5233911 End: 5235311 |
Description | pectinesterase 11 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 21 | 292 | 0 |
RVEKYGRGDFRTIQEAIDSVPANNAELVFISVAPGIYREKIIVPANKPFITISGTRASHTKITWSDGGSILDSATLTVLASHFIARSLTIQNTYGSYGKA VALRVSADRAAFYGCRILSYNHTLLDDTGNHYYSKCYIEGATDFISGNANSFFERCLLHSLSTWGGAITAQKRVSSEENTGFTFLDCKISGVGKAVLGRP WGPYSRVVYALTYMSDEIVPQGWNDLNDHAKHNKLYYGEYRCSGPGADGSKRVAWSNSLSDAEASMFLSKDL |
Full Sequence |
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Protein Sequence Length: 322 Download |
MATCSSTATI PKDFSTAVLI RVEKYGRGDF RTIQEAIDSV PANNAELVFI SVAPGIYREK 60 IIVPANKPFI TISGTRASHT KITWSDGGSI LDSATLTVLA SHFIARSLTI QNTYGSYGKA 120 VALRVSADRA AFYGCRILSY NHTLLDDTGN HYYSKCYIEG ATDFISGNAN SFFERCLLHS 180 LSTWGGAITA QKRVSSEENT GFTFLDCKIS GVGKAVLGRP WGPYSRVVYA LTYMSDEIVP 240 QGWNDLNDHA KHNKLYYGEY RCSGPGADGS KRVAWSNSLS DAEASMFLSK DLTGGGAWLR 300 NAALKFKDDF TINDAKTKGN R* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02773 | PLN02773 | 1.0e-87 | 19 | 291 | 292 | + pectinesterase | ||
PLN02665 | PLN02665 | 3.0e-91 | 19 | 299 | 295 | + pectinesterase family protein | ||
PLN02671 | PLN02671 | 3.0e-93 | 13 | 300 | 305 | + pectinesterase | ||
PLN02682 | PLN02682 | 9.0e-109 | 12 | 301 | 306 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 3.0e-166 | 8 | 300 | 293 | + putative pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN79458.1 | 0 | 5 | 306 | 31 | 332 | hypothetical protein [Vitis vinifera] |
EMBL | CBI37658.1 | 0 | 5 | 319 | 49 | 363 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002280496.1 | 0 | 14 | 319 | 1 | 306 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305435.1 | 0 | 1 | 307 | 8 | 315 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002512914.1 | 0 | 13 | 307 | 37 | 331 | Pectinesterase-3 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 20 | 306 | 9 | 315 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 22 | 308 | 7 | 313 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 0.00000000000003 | 30 | 294 | 18 | 335 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 0.00000000000003 | 30 | 294 | 18 | 335 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 0.00000000000003 | 30 | 294 | 18 | 335 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
AM722128 | 261 | 11 | 271 | 0 |
AM721699 | 255 | 11 | 265 | 0 |
DR952425 | 208 | 11 | 218 | 0 |
AJ795739 | 212 | 1 | 211 | 0 |
EX283718 | 192 | 115 | 306 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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