y
Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.H03296.1 |
Family | CE8 |
Protein Properties | Length: 332 Molecular Weight: 37000.1 Isoelectric Point: 8.0855 |
Chromosome | Chromosome/Scaffold: 8 Start: 48402600 End: 48404160 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 17 | 314 | 0 |
SRSGHGQFTTVQQAIDSIPAKNNVWTRILVKPGIYKEKVVIPADKPCIVLQGRTASDTVIEWGDGGEVNKTATFTLYAENFKAKNIRFEVKVYLANLIYF PVLSENLIIPYNLKTPHGDRNSIRQAPAFQITSDKVSFYQCAFIGVQDTLTDFQGRHYFESCYIEGAVDFIWGNGQSIYKGCTINASTAILGGFTGYITA QGRDSATDTTGYIFEQCSVVGTGPVYLGRAYRQYSRVVFHKTHLSSVVVPKGWDPWTYVGRERATTYAESECTGPGADKSKRVEWEMTLSGEELYKLT |
Full Sequence |
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Protein Sequence Length: 332 Download |
MQYLLLITLL LTPLSLSRSG HGQFTTVQQA IDSIPAKNNV WTRILVKPGI YKEKVVIPAD 60 KPCIVLQGRT ASDTVIEWGD GGEVNKTATF TLYAENFKAK NIRFEVKVYL ANLIYFPVLS 120 ENLIIPYNLK TPHGDRNSIR QAPAFQITSD KVSFYQCAFI GVQDTLTDFQ GRHYFESCYI 180 EGAVDFIWGN GQSIYKGCTI NASTAILGGF TGYITAQGRD SATDTTGYIF EQCSVVGTGP 240 VYLGRAYRQY SRVVFHKTHL SSVVVPKGWD PWTYVGRERA TTYAESECTG PGADKSKRVE 300 WEMTLSGEEL YKLTDVGTFV NQGGWLYKQP Y* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02480 | PLN02480 | 2.0e-78 | 20 | 326 | 310 | + Probable pectinesterase | ||
PLN02682 | PLN02682 | 4.0e-82 | 19 | 326 | 318 | + pectinesterase family protein | ||
PLN02176 | PLN02176 | 1.0e-83 | 19 | 330 | 314 | + putative pectinesterase | ||
PLN02432 | PLN02432 | 6.0e-84 | 18 | 309 | 292 | + putative pectinesterase | ||
PLN02497 | PLN02497 | 9.0e-116 | 18 | 330 | 314 | + probable pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI40838.1 | 0 | 3 | 330 | 27 | 341 | unnamed protein product [Vitis vinifera] |
GenBank | EAY73651.1 | 0 | 16 | 330 | 44 | 334 | hypothetical protein OsI_01540 [Oryza sativa Indica Group] |
RefSeq | XP_002263748.1 | 0 | 14 | 330 | 32 | 328 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002512520.1 | 0 | 1 | 315 | 1 | 316 | Pectinesterase-2 precursor, putative [Ricinus communis] |
RefSeq | XP_002529267.1 | 0 | 14 | 330 | 40 | 337 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 4e-36 | 16 | 326 | 11 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 2e-28 | 16 | 301 | 7 | 277 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 0.00000000000003 | 14 | 216 | 8 | 209 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 0.00000000000003 | 14 | 216 | 8 | 209 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 0.00000000000003 | 14 | 216 | 8 | 209 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |