y
Basic Information | |
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Species | Manihot esculenta |
Cazyme ID | cassava4.1_021555m |
Family | CE8 |
Protein Properties | Length: 367 Molecular Weight: 40708.8 Isoelectric Point: 10.063 |
Chromosome | Chromosome/Scaffold: 10275 Start: 498 End: 1868 |
Description | Pectin lyase-like superfamily protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 71 | 356 | 0 |
IIVSKDGKGEFKTVTDAINSVPPKNKQRVIIKIGPGVYTEKIQIERTKHFITFLGDPKAMPTLAFNGTAYEYGTLASASVAIESTYFMAVNIIFKNTAPG PDSKKPGAQAVALRVGGDKAAFYNCKMFGFQDTLCDDRGRHFYKNCYVQGTVDFIFGRGRSLYLESHINVVNRKGSTYITAQAKQNKTEVYGYSFVQCKI TGSGSRAYLGRAWRAMPEVVFSYTEMGAVVDPLGWSNNRLPERERTVFFAEYKNSGPGSNLKRRVKFAKKLTDREAKHFLSLGYIE |
Full Sequence |
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Protein Sequence Length: 367 Download |
MARGRYIDAI YCVLIAIFVV ATTVSSDDIT PIPADDSKVS NWFQTNVKPW KSRKGTLDPA 60 LEAAEAKSKI IIVSKDGKGE FKTVTDAINS VPPKNKQRVI IKIGPGVYTE KIQIERTKHF 120 ITFLGDPKAM PTLAFNGTAY EYGTLASASV AIESTYFMAV NIIFKNTAPG PDSKKPGAQA 180 VALRVGGDKA AFYNCKMFGF QDTLCDDRGR HFYKNCYVQG TVDFIFGRGR SLYLESHINV 240 VNRKGSTYIT AQAKQNKTEV YGYSFVQCKI TGSGSRAYLG RAWRAMPEVV FSYTEMGAVV 300 DPLGWSNNRL PERERTVFFA EYKNSGPGSN LKRRVKFAKK LTDREAKHFL SLGYIEGSKW 360 LLPPPM* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02432 | PLN02432 | 1.0e-85 | 70 | 361 | 294 | + putative pectinesterase | ||
PLN02671 | PLN02671 | 3.0e-87 | 68 | 361 | 309 | + pectinesterase | ||
PLN02304 | PLN02304 | 1.0e-89 | 70 | 363 | 302 | + probable pectinesterase | ||
PLN02682 | PLN02682 | 2.0e-113 | 10 | 363 | 367 | + pectinesterase family protein | ||
PLN02665 | PLN02665 | 0 | 5 | 365 | 362 | + pectinesterase family protein |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002318197.1 | 0 | 7 | 365 | 4 | 363 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002333446.1 | 0 | 4 | 365 | 2 | 364 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002511043.1 | 0 | 6 | 365 | 7 | 364 | Pectinesterase-1 precursor, putative [Ricinus communis] |
RefSeq | XP_002511045.1 | 0 | 6 | 365 | 7 | 365 | Pectinesterase-1 precursor, putative [Ricinus communis] |
RefSeq | XP_002530224.1 | 0 | 1 | 365 | 1 | 366 | Pectinesterase U1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 2.00386e-43 | 71 | 361 | 9 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 3e-40 | 72 | 361 | 6 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 1e-20 | 74 | 349 | 12 | 328 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 1e-20 | 74 | 349 | 12 | 328 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 1e-20 | 74 | 349 | 12 | 328 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |