y
Basic Information | |
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Species | Mimulus guttatus |
Cazyme ID | mgv1a008469m |
Family | CE8 |
Protein Properties | Length: 374 Molecular Weight: 40732.6 Isoelectric Point: 8.0822 |
Chromosome | Chromosome/Scaffold: 240 Start: 127419 End: 131115 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 72 | 363 | 0 |
ITVDVGGSGDFRSVQAAVDSVPENNRKNVLILIGAGYYIEKVVVPACKPYITFEGAGRETTFIEWHDRASDKGPDGQQLRTYHTASVSVFAPYFSARNIS FKNTAPAPLPGMQGWQAVAFRISGDKAFFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKNCELHSIATRFGSIAAQNRNSPDEKTGFA FVNCTVTGTGPLYVGRAMGQYSRIVFSYTYFDDVVAHGGWDDWDHISNKNKTAYFGVYKCFGPGAARVRGVSWARELDYDSAHPFIAKSFVN |
Full Sequence |
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Protein Sequence Length: 374 Download |
MAGFIFSSFI NTHNNIFIII SILFTYFISL HAGNVVNSAT AAAANNTAAA ASNSSSKHGH 60 HKWVGPSGHL LITVDVGGSG DFRSVQAAVD SVPENNRKNV LILIGAGYYI EKVVVPACKP 120 YITFEGAGRE TTFIEWHDRA SDKGPDGQQL RTYHTASVSV FAPYFSARNI SFKNTAPAPL 180 PGMQGWQAVA FRISGDKAFF SGCGFYGAQD TLCDDAGRHY FKECYIEGSI DFIFGNGRSM 240 YKNCELHSIA TRFGSIAAQN RNSPDEKTGF AFVNCTVTGT GPLYVGRAMG QYSRIVFSYT 300 YFDDVVAHGG WDDWDHISNK NKTAYFGVYK CFGPGAARVR GVSWARELDY DSAHPFIAKS 360 FVNGRHWIAP SDA* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02665 | PLN02665 | 2.0e-105 | 71 | 370 | 302 | + pectinesterase family protein | ||
PLN02304 | PLN02304 | 2.0e-106 | 72 | 373 | 310 | + probable pectinesterase | ||
PLN02671 | PLN02671 | 1.0e-111 | 71 | 368 | 300 | + pectinesterase | ||
PLN02682 | PLN02682 | 7.0e-137 | 78 | 370 | 293 | + pectinesterase family protein | ||
PLN02634 | PLN02634 | 0 | 57 | 373 | 317 | + probable pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABD65006.1 | 0 | 46 | 373 | 17 | 344 | pectinesterase family protein [Brassica oleracea] |
EMBL | CBI31927.1 | 0 | 47 | 373 | 23 | 349 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_199561.1 | 0 | 14 | 373 | 6 | 362 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002266321.1 | 0 | 47 | 373 | 30 | 356 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002303355.1 | 0 | 56 | 370 | 1 | 314 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 5.00264e-43 | 64 | 368 | 5 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 3e-33 | 78 | 368 | 11 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 7e-20 | 81 | 322 | 43 | 311 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 1qjv_B | 1e-16 | 82 | 248 | 18 | 192 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 1e-16 | 82 | 248 | 18 | 192 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |