y
Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g046674m |
Family | CE8 |
Protein Properties | Length: 261 Molecular Weight: 28675.3 Isoelectric Point: 8.5287 |
Chromosome | Chromosome/Scaffold: 00302 Start: 122866 End: 124077 |
Description | pectinesterase 11 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 8 | 260 | 0 |
RVDQSGRGDFKKIQDAIDSVPSNNSKLYFIWIKPGTYREKIVVPADKPFITISGTKASNTIITWSDGGEIFQSATFTVMASDFVGRFLTIENTYGSAGKA VALRVSANRAAFYGCRILSYQDTLLDDTGNHYYSSCYIEGATDFICGNAASLFERCHIHSLSTGNGAITAQKRVSSEENTGFTFLGCKITGVGKAVLGRP WGPYSRVVYALTYMSGLVLPQGWNDWHDYAKHTNVYYGEYKCYGPGADRSSRV |
Full Sequence |
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Protein Sequence Length: 261 Download |
MSTTILIRVD QSGRGDFKKI QDAIDSVPSN NSKLYFIWIK PGTYREKIVV PADKPFITIS 60 GTKASNTIIT WSDGGEIFQS ATFTVMASDF VGRFLTIENT YGSAGKAVAL RVSANRAAFY 120 GCRILSYQDT LLDDTGNHYY SSCYIEGATD FICGNAASLF ERCHIHSLST GNGAITAQKR 180 VSSEENTGFT FLGCKITGVG KAVLGRPWGP YSRVVYALTY MSGLVLPQGW NDWHDYAKHT 240 NVYYGEYKCY GPGADRSSRV A 300 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01095 | Pectinesterase | 2.0e-82 | 9 | 260 | 270 | + Pectinesterase. | ||
PLN02773 | PLN02773 | 3.0e-86 | 1 | 261 | 280 | + pectinesterase | ||
PLN02665 | PLN02665 | 2.0e-88 | 6 | 260 | 268 | + pectinesterase family protein | ||
PLN02682 | PLN02682 | 1.0e-103 | 7 | 261 | 272 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 7.0e-177 | 1 | 261 | 261 | + putative pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN79458.1 | 0 | 1 | 260 | 40 | 299 | hypothetical protein [Vitis vinifera] |
EMBL | CBI37658.1 | 0 | 1 | 260 | 58 | 317 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002280496.1 | 0 | 1 | 260 | 1 | 260 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305435.1 | 0 | 1 | 260 | 21 | 281 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002512914.1 | 0 | 1 | 260 | 38 | 297 | Pectinesterase-3 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 7 | 260 | 9 | 279 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 9 | 260 | 7 | 275 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 0.000000000000002 | 17 | 254 | 18 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 0.000000000000002 | 17 | 254 | 18 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 0.000000000000002 | 17 | 254 | 18 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
AM722128 | 252 | 3 | 254 | 0 |
AM721699 | 250 | 3 | 252 | 0 |
DR952425 | 205 | 1 | 205 | 0 |
AJ795739 | 199 | 1 | 198 | 0 |
DR952425 | 56 | 172 | 227 | 6.1 |
Sequence Alignments (This image is cropped. Click for full image.) |
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