y
Basic Information | |
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Species | Mimulus guttatus |
Cazyme ID | mgv1a023562m |
Family | CE8 |
Protein Properties | Length: 336 Molecular Weight: 36987.8 Isoelectric Point: 8.1333 |
Chromosome | Chromosome/Scaffold: 29 Start: 187828 End: 189754 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 34 | 323 | 0 |
IFVDPSGEGNFTRIQDAIDSVPSNNQRWICIRIKKGVYRERITIPYDKPFISLEGSGKRKTYVVGDAHDSIATSATFTSQADNIIAKSLSFMNSYNYPLN NGSHRNPMKTAVAALIEGDKSAFYGCGFFGLQDTLWDVQGRHYFKHCTIQGAVDFIFGAGQSVYERCTIAAVAGALNGAPGYITAQGRTAANETNGFVFK NCNIVGSGKTYLGRPWRSYARVIFYNTLMSNIVVPQGWDPWFCTGHKDALTFDEIGCRGSGSNKSRRVSWSNRLSNYTELEQLTSISYID |
Full Sequence |
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Protein Sequence Length: 336 Download |
MSIHQWFISI FIAICLVFPS GNATLIPVIG CPTIFVDPSG EGNFTRIQDA IDSVPSNNQR 60 WICIRIKKGV YRERITIPYD KPFISLEGSG KRKTYVVGDA HDSIATSATF TSQADNIIAK 120 SLSFMNSYNY PLNNGSHRNP MKTAVAALIE GDKSAFYGCG FFGLQDTLWD VQGRHYFKHC 180 TIQGAVDFIF GAGQSVYERC TIAAVAGALN GAPGYITAQG RTAANETNGF VFKNCNIVGS 240 GKTYLGRPWR SYARVIFYNT LMSNIVVPQG WDPWFCTGHK DALTFDEIGC RGSGSNKSRR 300 VSWSNRLSNY TELEQLTSIS YIDDGDWLST ILSSD* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02480 | PLN02480 | 3.0e-85 | 33 | 328 | 297 | + Probable pectinesterase | ||
PLN02682 | PLN02682 | 1.0e-85 | 17 | 328 | 323 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 1.0e-85 | 34 | 328 | 295 | + putative pectinesterase | ||
PLN02176 | PLN02176 | 3.0e-99 | 4 | 329 | 332 | + putative pectinesterase | ||
PLN02497 | PLN02497 | 3.0e-156 | 1 | 328 | 329 | + probable pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI40838.1 | 0 | 33 | 329 | 44 | 338 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_189055.1 | 0 | 1 | 331 | 1 | 331 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002263748.1 | 0 | 1 | 329 | 1 | 325 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002323773.1 | 0 | 34 | 329 | 1 | 285 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518106.1 | 0 | 33 | 329 | 47 | 332 | Pectinesterase U1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 5.60519e-45 | 32 | 328 | 7 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 2e-31 | 36 | 330 | 7 | 306 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 6e-23 | 44 | 331 | 18 | 341 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 6e-23 | 44 | 331 | 18 | 341 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 1e-22 | 44 | 331 | 18 | 341 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |