y
Basic Information | |
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Species | Arabidopsis thaliana |
Cazyme ID | AT5G07430.1 |
Family | CE8 |
Protein Properties | Length: 362 Molecular Weight: 39910.5 Isoelectric Point: 9.1145 |
Chromosome | Chromosome/Scaffold: 5 Start: 2352439 End: 2354202 |
Description | pectinesterase, putative, expressed |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 67 | 350 | 0 |
ITVNQKGGANFKTLNEAIKSIPTGNKNRVIIKLAPGVYNEKVTIDIARPFITLLGQPGAETVLTYHGTAAQYGTVESATLIVWAEYFQAAHLTIKNTAPM PKPGSQGQALAMRINADKAAFYSCRFHGFQDTLCDDKGNHFFKDCYIEGTYDFIFGRGASLYLNTQLHAVGDGLRVITAQGRQSATEQNGYTFVHCKVTG TGTGIYLGRSWMSHPKVVYAFTEMTSVVNPSGWRENLNRGYDKTVFYGEYKCFGPGSHLEKRVPYTQDIDKNEVTPFLTLGYIK |
Full Sequence |
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Protein Sequence Length: 362 Download |
MGYISMSVVA FLVVFASPVV LATDTDPIPE NRAQIPQWFK TNVKPYSQRK GTLDPALEAA 60 EAARQIITVN QKGGANFKTL NEAIKSIPTG NKNRVIIKLA PGVYNEKVTI DIARPFITLL 120 GQPGAETVLT YHGTAAQYGT VESATLIVWA EYFQAAHLTI KNTAPMPKPG SQGQALAMRI 180 NADKAAFYSC RFHGFQDTLC DDKGNHFFKD CYIEGTYDFI FGRGASLYLN TQLHAVGDGL 240 RVITAQGRQS ATEQNGYTFV HCKVTGTGTG IYLGRSWMSH PKVVYAFTEM TSVVNPSGWR 300 ENLNRGYDKT VFYGEYKCFG PGSHLEKRVP YTQDIDKNEV TPFLTLGYIK GSTWLLPPPK 360 Y* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02304 | PLN02304 | 7.0e-88 | 66 | 357 | 302 | + probable pectinesterase | ||
PLN02634 | PLN02634 | 9.0e-89 | 12 | 357 | 356 | + probable pectinesterase | ||
PLN02432 | PLN02432 | 1.0e-96 | 66 | 355 | 290 | + putative pectinesterase | ||
PLN02682 | PLN02682 | 2.0e-108 | 8 | 357 | 368 | + pectinesterase family protein | ||
PLN02665 | PLN02665 | 0 | 1 | 361 | 363 | + pectinesterase family protein |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0009505 | plant-type cell wall |
GO:0012505 | endomembrane system |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAB87930.1 | 0 | 19 | 359 | 1 | 340 | pectin methyl-esterase-like protein [Arabidopsis thaliana] |
RefSeq | NP_177152.2 | 0 | 1 | 359 | 1 | 359 | PPME1; pectinesterase [Arabidopsis thaliana] |
RefSeq | NP_196359.1 | 0 | 24 | 361 | 24 | 361 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | NP_196360.1 | 0 | 24 | 361 | 24 | 361 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | NP_568181.1 | 0 | 1 | 359 | 1 | 359 | pectinesterase family protein [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 1e-38 | 67 | 355 | 9 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 3e-37 | 69 | 355 | 7 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 9e-21 | 74 | 286 | 41 | 276 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 1qjv_B | 1e-19 | 66 | 233 | 7 | 190 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 1e-19 | 66 | 233 | 7 | 190 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |