y
Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr6g012800.1 |
Family | CE8 |
Protein Properties | Length: 317 Molecular Weight: 35535.4 Isoelectric Point: 8.5287 |
Chromosome | Chromosome/Scaffold: 6 Start: 3133225 End: 3135885 |
Description | pectin methylesterase 31 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 6 | 296 | 0 |
LTVSQNGTGNYRTVQEAIDAVPLRNTRRTIIRISPGIYRQPLYVAKTKNFITFVGLCPEDTVLTWNNTANKIDHHQGSKVIGNGTFGCGSTIVEGEDFIA ENITFENFSPEGSGQAVAVRVSGDRCAFYNCRFLGWQDTLYLHSGKQYLRDCYIEGSVDFIFGNSTALLEHCHIHCKSAGFITAQSRKSPHEKTGYVFLR CAITGNGGSSYAYLGRPWGPFGRVVFAFTYMDNCIKPAGWNNWGKVENEKSACFYEHRCFGPGFCPSKRVKWARVLKDKEAEEFLMHSFID |
Full Sequence |
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Protein Sequence Length: 317 Download |
MAPFVLTVSQ NGTGNYRTVQ EAIDAVPLRN TRRTIIRISP GIYRQPLYVA KTKNFITFVG 60 LCPEDTVLTW NNTANKIDHH QGSKVIGNGT FGCGSTIVEG EDFIAENITF ENFSPEGSGQ 120 AVAVRVSGDR CAFYNCRFLG WQDTLYLHSG KQYLRDCYIE GSVDFIFGNS TALLEHCHIH 180 CKSAGFITAQ SRKSPHEKTG YVFLRCAITG NGGSSYAYLG RPWGPFGRVV FAFTYMDNCI 240 KPAGWNNWGK VENEKSACFY EHRCFGPGFC PSKRVKWARV LKDKEAEEFL MHSFIDPEPQ 300 KPWLAQRMAL RIPYSA* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01095 | Pectinesterase | 2.0e-92 | 7 | 296 | 308 | + Pectinesterase. | ||
PLN02665 | PLN02665 | 3.0e-94 | 2 | 296 | 303 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 1.0e-99 | 5 | 304 | 302 | + putative pectinesterase | ||
PLN02682 | PLN02682 | 2.0e-105 | 4 | 296 | 301 | + pectinesterase family protein | ||
PLN02773 | PLN02773 | 0 | 1 | 316 | 316 | + pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABN08265.1 | 0 | 1 | 316 | 1 | 316 | Pectinesterase [Medicago truncatula] |
RefSeq | NP_566842.1 | 0 | 5 | 316 | 6 | 317 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002283941.1 | 0 | 1 | 316 | 1 | 316 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305315.1 | 0 | 1 | 316 | 1 | 316 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002530008.1 | 0 | 1 | 316 | 1 | 316 | Pectinesterase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 6 | 295 | 9 | 302 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 8 | 308 | 7 | 297 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 2e-25 | 5 | 302 | 7 | 342 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 2e-25 | 5 | 302 | 7 | 342 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 2e-25 | 5 | 302 | 7 | 342 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY292729 | 314 | 1 | 313 | 0 |
DY292725 | 301 | 1 | 301 | 0 |
GR994392 | 306 | 1 | 306 | 0 |
ES797575 | 314 | 1 | 314 | 0 |
ES794113 | 290 | 1 | 290 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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