y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.001G130900.1 |
Family | CE8 |
Protein Properties | Length: 298 Molecular Weight: 32736 Isoelectric Point: 8.334 |
Chromosome | Chromosome/Scaffold: 01 Start: 16622987 End: 16624205 |
Description | pectinesterase 11 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 18 | 284 | 0 |
DPSGKGDYRKIQDAIDAVPSNNKQVVLISVKPGIYEEKIIVPANKPFITISGSNPNDTVITWNDSGNIFESPTFSVLASDFVAQYLTIQNTYGVGAKAVA LRVSGDRVAFFGCRILSYQDTLLDDTGRHYYSNCYIEGAVDFICGNAASLFEKCHLHSLSEGDASITAQHRDSPSQNTGFTFLGCKITGVKTALLGRAWG PYSRVIFAFTYMSNVILPQGWDDWGDSSKQREYKCYGPGASTKKRVEWAKELTIEEANPFLTKNMIG |
Full Sequence |
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Protein Sequence Length: 298 Download |
MASHGSNAAT KALLIKIDPS GKGDYRKIQD AIDAVPSNNK QVVLISVKPG IYEEKIIVPA 60 NKPFITISGS NPNDTVITWN DSGNIFESPT FSVLASDFVA QYLTIQNTYG VGAKAVALRV 120 SGDRVAFFGC RILSYQDTLL DDTGRHYYSN CYIEGAVDFI CGNAASLFEK CHLHSLSEGD 180 ASITAQHRDS PSQNTGFTFL GCKITGVKTA LLGRAWGPYS RVIFAFTYMS NVILPQGWDD 240 WGDSSKQREY KCYGPGASTK KRVEWAKELT IEEANPFLTK NMIGGKSWIT STTYRFTK 300 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02634 | PLN02634 | 5.0e-93 | 13 | 290 | 300 | + probable pectinesterase | ||
PLN02773 | PLN02773 | 1.0e-94 | 14 | 283 | 293 | + pectinesterase | ||
PLN02665 | PLN02665 | 6.0e-97 | 8 | 289 | 298 | + pectinesterase family protein | ||
PLN02682 | PLN02682 | 3.0e-116 | 4 | 290 | 309 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 0 | 5 | 289 | 290 | + putative pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN79458.1 | 0 | 6 | 298 | 37 | 334 | hypothetical protein [Vitis vinifera] |
EMBL | CBI19714.1 | 0 | 1 | 298 | 107 | 409 | unnamed protein product [Vitis vinifera] |
EMBL | CBI37658.1 | 0 | 6 | 298 | 55 | 352 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002280496.1 | 0 | 10 | 298 | 2 | 295 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002281308.1 | 0 | 1 | 298 | 50 | 352 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 15 | 297 | 9 | 316 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 21 | 292 | 11 | 307 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 1e-21 | 12 | 284 | 6 | 335 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 1e-21 | 12 | 284 | 6 | 335 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 1e-21 | 12 | 284 | 6 | 335 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
AM722128 | 263 | 4 | 261 | 0 |
AM721699 | 257 | 4 | 255 | 0 |
DR952425 | 209 | 5 | 213 | 0 |
AJ795739 | 203 | 5 | 206 | 0 |
GE477037 | 207 | 23 | 225 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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