y
Basic Information | |
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Species | Manihot esculenta |
Cazyme ID | cassava4.1_009618m |
Family | CE8 |
Protein Properties | Length: 383 Molecular Weight: 42197.8 Isoelectric Point: 8.7028 |
Chromosome | Chromosome/Scaffold: 07571 Start: 584500 End: 586451 |
Description | Pectin lyase-like superfamily protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 84 | 373 | 0 |
ITVNQNGTGDFKTITEALKSIPPYNTRRVIIAIKPGVYREKIAIPRTLPFITFMGDSSDPPIITGNDTASSVSGKDGMPLRTFQSATVAVDADYFIAINV KFENTAPHEIGSKGGQAVALRISGTKAAFYNCSFHGSQDTLYDHKGLHYFNNCFIQGSVDFIFGSGRSLYENCHLNSISKKVASLTAQKRSNLSLESGFS FKDCVVTGSGLVYLGRAWGDYSRVVFSYTFMDKVVLPQGWNDWGDQKRDTRVFYAEYKCSGPGANFTGRVPWARVLTDEEAVPFIGTYYV |
Full Sequence |
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Protein Sequence Length: 383 Download |
MALKNHIYLL LLLSTISSCL KLSSSVLDAE TDYNKWVSWN IDHHRRKAIL EAKPTTQPSA 60 GISTGGKANL DDKLRKAEMH NVSITVNQNG TGDFKTITEA LKSIPPYNTR RVIIAIKPGV 120 YREKIAIPRT LPFITFMGDS SDPPIITGND TASSVSGKDG MPLRTFQSAT VAVDADYFIA 180 INVKFENTAP HEIGSKGGQA VALRISGTKA AFYNCSFHGS QDTLYDHKGL HYFNNCFIQG 240 SVDFIFGSGR SLYENCHLNS ISKKVASLTA QKRSNLSLES GFSFKDCVVT GSGLVYLGRA 300 WGDYSRVVFS YTFMDKVVLP QGWNDWGDQK RDTRVFYAEY KCSGPGANFT GRVPWARVLT 360 DEEAVPFIGT YYVDGDTWLI TP* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02634 | PLN02634 | 1.0e-105 | 84 | 382 | 301 | + probable pectinesterase | ||
PLN02671 | PLN02671 | 2.0e-109 | 84 | 379 | 298 | + pectinesterase | ||
PLN02432 | PLN02432 | 9.0e-112 | 84 | 379 | 296 | + putative pectinesterase | ||
PLN02665 | PLN02665 | 2.0e-131 | 67 | 382 | 319 | + pectinesterase family protein | ||
PLN02682 | PLN02682 | 2.0e-145 | 83 | 379 | 299 | + pectinesterase family protein |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN79461.1 | 0 | 28 | 382 | 31 | 381 | hypothetical protein [Vitis vinifera] |
GenBank | EAZ19254.1 | 0 | 21 | 382 | 63 | 426 | hypothetical protein OsJ_34791 [Oryza sativa Japonica Group] |
GenBank | EEC69509.1 | 0 | 70 | 382 | 95 | 411 | hypothetical protein OsI_38743 [Oryza sativa Indica Group] |
RefSeq | NP_001067039.1 | 0 | 70 | 382 | 94 | 410 | Os12g0563700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002320279.1 | 0 | 92 | 379 | 1 | 287 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 83 | 379 | 8 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 2.00386e-43 | 86 | 379 | 7 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 1e-20 | 77 | 347 | 28 | 335 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 3e-19 | 77 | 367 | 1 | 328 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 3e-19 | 77 | 367 | 1 | 328 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |