y
Basic Information | |
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Species | Prunus persica |
Cazyme ID | ppa007766m |
Family | CE8 |
Protein Properties | Length: 357 Molecular Weight: 38720.7 Isoelectric Point: 6.9115 |
Chromosome | Chromosome/Scaffold: 1 Start: 45831906 End: 45833429 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 59 | 343 | 0 |
KVMKDGSGQFKTITDAINSIPADNTKRVIVYIGEGKYEEKITIPRNKPFVTFFGSPTNMPTLTFAGTAQKYGTVNSATVIVESDYFMAANVIIKNSSPRP DGKAVGAQAVALRVSGNKSALYNCKLIGFQDTFCDDKGNHFLKDCFIEGTVDFIWGSGKSLYLNNELHVVGDNGLTVITAQARDSSSDDTGYSFVHCKIT GTGNGTYLGRAWRISPMVVFAYTSMSEVINPAGWSDDNHPERDNTVFYGEYKCSGPGSSAAGRVKYTKQLTDEQIKPFLSLGYIQ |
Full Sequence |
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Protein Sequence Length: 357 Download |
MTLILLTATI AMADDDTPIP ANQPQVNTWF NNNVKPYTER QGTLDPALAT AEAGQTVIKV 60 MKDGSGQFKT ITDAINSIPA DNTKRVIVYI GEGKYEEKIT IPRNKPFVTF FGSPTNMPTL 120 TFAGTAQKYG TVNSATVIVE SDYFMAANVI IKNSSPRPDG KAVGAQAVAL RVSGNKSALY 180 NCKLIGFQDT FCDDKGNHFL KDCFIEGTVD FIWGSGKSLY LNNELHVVGD NGLTVITAQA 240 RDSSSDDTGY SFVHCKITGT GNGTYLGRAW RISPMVVFAY TSMSEVINPA GWSDDNHPER 300 DNTVFYGEYK CSGPGSSAAG RVKYTKQLTD EQIKPFLSLG YIQGSKWLLP PPNPKV* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02671 | PLN02671 | 2.0e-86 | 54 | 348 | 305 | + pectinesterase | ||
PLN02432 | PLN02432 | 6.0e-88 | 55 | 348 | 294 | + putative pectinesterase | ||
PLN02304 | PLN02304 | 1.0e-88 | 60 | 350 | 301 | + probable pectinesterase | ||
PLN02682 | PLN02682 | 9.0e-112 | 57 | 350 | 302 | + pectinesterase family protein | ||
PLN02665 | PLN02665 | 0 | 1 | 353 | 353 | + pectinesterase family protein |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002309337.1 | 0 | 1 | 353 | 15 | 368 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002318197.1 | 0 | 1 | 353 | 11 | 364 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321778.1 | 0 | 1 | 353 | 12 | 362 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002333446.1 | 0 | 1 | 353 | 12 | 365 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002511045.1 | 0 | 5 | 353 | 19 | 366 | Pectinesterase-1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 2.99878e-43 | 58 | 348 | 9 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 8e-37 | 60 | 348 | 7 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 3e-19 | 57 | 336 | 8 | 328 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 3e-19 | 57 | 336 | 8 | 328 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 3e-19 | 57 | 336 | 8 | 328 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |