y
Basic Information | |
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Species | Aquilegia coerulea |
Cazyme ID | Aquca_001_00227.1 |
Family | CE8 |
Protein Properties | Length: 382 Molecular Weight: 42171.7 Isoelectric Point: 9.6687 |
Chromosome | Chromosome/Scaffold: 1 Start: 2155391 End: 2158196 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 84 | 375 | 0 |
IVSKNKADGGFTSIQDAIDSLPFINLVRVEIKVKAGVYTEKVNIPPLKSFISIEGAGADKTIVQWGDTAKTIGARGQPMGTFNSATFAVNSLYFIAKNIT FKNTTPPPKPGAVGKQAVAFRISGDTAAFLGCRFLGAQDTLYDHLGRHYYKDCYIEGSVDFIFGNALSLYEGCHVHAIAQNYGALTAQGRTSLLEDTGFS FVNCKVTGSGALYLGRAWGTFSRVVFAYTYMDNIIIPKGWYNWGDPNREMTVFYGQYKCTGPGASFAGRVSWSRELTDEEAKPFISLSFIDG |
Full Sequence |
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Protein Sequence Length: 382 Download |
MSNLRHIICV ILLLFLLNSG QILCHTKGIR PRKPIMGKKL LPINVTQTQL SEQQFMKWVK 60 FVGSLRHTLF SAAWNKILPA FTIIVSKNKA DGGFTSIQDA IDSLPFINLV RVEIKVKAGV 120 YTEKVNIPPL KSFISIEGAG ADKTIVQWGD TAKTIGARGQ PMGTFNSATF AVNSLYFIAK 180 NITFKNTTPP PKPGAVGKQA VAFRISGDTA AFLGCRFLGA QDTLYDHLGR HYYKDCYIEG 240 SVDFIFGNAL SLYEGCHVHA IAQNYGALTA QGRTSLLEDT GFSFVNCKVT GSGALYLGRA 300 WGTFSRVVFA YTYMDNIIIP KGWYNWGDPN REMTVFYGQY KCTGPGASFA GRVSWSRELT 360 DEEAKPFISL SFIDGLEWIK F* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02432 | PLN02432 | 5.0e-115 | 92 | 380 | 289 | + putative pectinesterase | ||
PLN02304 | PLN02304 | 2.0e-116 | 94 | 381 | 296 | + probable pectinesterase | ||
PLN02665 | PLN02665 | 8.0e-120 | 82 | 379 | 300 | + pectinesterase family protein | ||
PLN02634 | PLN02634 | 7.0e-123 | 83 | 379 | 298 | + probable pectinesterase | ||
PLN02682 | PLN02682 | 0 | 5 | 380 | 376 | + pectinesterase family protein |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN63186.1 | 0 | 1 | 380 | 1 | 378 | hypothetical protein [Vitis vinifera] |
EMBL | CBI27989.1 | 0 | 69 | 380 | 1 | 312 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_197474.1 | 0 | 19 | 381 | 23 | 383 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002330522.1 | 0 | 1 | 380 | 1 | 380 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002514210.1 | 0 | 1 | 380 | 1 | 382 | Pectinesterase PPE8B precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 84 | 380 | 9 | 309 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 2.99878e-43 | 92 | 380 | 13 | 305 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 3e-25 | 81 | 367 | 31 | 352 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 3e-20 | 81 | 367 | 4 | 328 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 3e-20 | 81 | 367 | 4 | 328 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |