y
Basic Information | |
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Species | Prunus persica |
Cazyme ID | ppa007761m |
Family | CE8 |
Protein Properties | Length: 357 Molecular Weight: 38809.8 Isoelectric Point: 6.3603 |
Chromosome | Chromosome/Scaffold: 3 Start: 10312981 End: 10314692 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 59 | 344 | 0 |
KVMKDGSGQFKTITDAINSIPADNTKRVIVYIGEGEYEEKITIPRNKPFVTFYGSPTNMPTLTFTGTAQKYGTVNSATVIVESDYFMAANVIIKNSSPRP DGKAVGAQAVALRVSGNKSALYNCKLIGFQDTLCDDKGNHFFKDCFIEGTVDFIWGSGKSLYLNNELHVVGDNGLTVITAQARDSASDDTGYSFAHCNIT GTGNGTYLGRAWRISPMVVFAYTSMSKVINPAGWSNDNHPERDNTVFYGEYKCSGPGSSVAGRVKYIKHMTDEQIKPFLSLDYIQG |
Full Sequence |
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Protein Sequence Length: 357 Download |
MTLILLTATI AMADDDTPVP ADQSQVNTWF NNNVKPYTER QGTLDPALAT AEAGQTVIKV 60 MKDGSGQFKT ITDAINSIPA DNTKRVIVYI GEGEYEEKIT IPRNKPFVTF YGSPTNMPTL 120 TFTGTAQKYG TVNSATVIVE SDYFMAANVI IKNSSPRPDG KAVGAQAVAL RVSGNKSALY 180 NCKLIGFQDT LCDDKGNHFF KDCFIEGTVD FIWGSGKSLY LNNELHVVGD NGLTVITAQA 240 RDSASDDTGY SFAHCNITGT GNGTYLGRAW RISPMVVFAY TSMSKVINPA GWSNDNHPER 300 DNTVFYGEYK CSGPGSSVAG RVKYIKHMTD EQIKPFLSLD YIQGSKWLLP PPNPKV* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02671 | PLN02671 | 2.0e-84 | 54 | 348 | 305 | + pectinesterase | ||
PLN02432 | PLN02432 | 9.0e-87 | 55 | 348 | 294 | + putative pectinesterase | ||
PLN02304 | PLN02304 | 6.0e-89 | 60 | 350 | 301 | + probable pectinesterase | ||
PLN02682 | PLN02682 | 1.0e-111 | 57 | 350 | 302 | + pectinesterase family protein | ||
PLN02665 | PLN02665 | 0 | 1 | 353 | 353 | + pectinesterase family protein |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002309337.1 | 0 | 1 | 353 | 15 | 368 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002318197.1 | 0 | 1 | 353 | 11 | 364 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321778.1 | 0 | 1 | 353 | 12 | 362 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002333446.1 | 0 | 1 | 353 | 12 | 365 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002511045.1 | 0 | 5 | 353 | 19 | 366 | Pectinesterase-1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 2.94273e-44 | 58 | 348 | 9 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 4e-39 | 60 | 348 | 7 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 1e-20 | 57 | 225 | 8 | 190 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 1e-20 | 57 | 225 | 8 | 190 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 1e-20 | 57 | 225 | 8 | 190 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |