y
Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10005724m |
Family | CE8 |
Protein Properties | Length: 318 Molecular Weight: 35465.9 Isoelectric Point: 7.2336 |
Chromosome | Chromosome/Scaffold: 6 Start: 5444833 End: 5446856 |
Description | pectin methylesterase 31 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 7 | 296 | 0 |
VRVAQDGSGDYYSVQDAIDSVPLGNTCRTVIRISPGIYRQPVYVPKRKNFITFAGISPEITVLTWNNTASKIEHHQASRVIGTGTFGCGTVIVEGEDFIA ENVTFENSAPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHHGKQYLKDCYVEGSVDFIFGNSTALLEHCHIHCKAQGFITAQSRKSSQESTGYVFLR CVITGNGQSAYMYLGRPWGPFGRVVLAYTYMDACIRNVGWHNWGNSENERSACFYEYRCFGPGSCSSGRVTWSRELMDEEAGHFLHHGFV |
Full Sequence |
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Protein Sequence Length: 318 Download |
MATSRMVRVA QDGSGDYYSV QDAIDSVPLG NTCRTVIRIS PGIYRQPVYV PKRKNFITFA 60 GISPEITVLT WNNTASKIEH HQASRVIGTG TFGCGTVIVE GEDFIAENVT FENSAPEGSG 120 QAVAIRVTAD RCAFYNCRFL GWQDTLYLHH GKQYLKDCYV EGSVDFIFGN STALLEHCHI 180 HCKAQGFITA QSRKSSQEST GYVFLRCVIT GNGQSAYMYL GRPWGPFGRV VLAYTYMDAC 240 IRNVGWHNWG NSENERSACF YEYRCFGPGS CSSGRVTWSR ELMDEEAGHF LHHGFVDPDQ 300 DRPWLCLRMG VKTPYSA* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01095 | Pectinesterase | 8.0e-89 | 7 | 299 | 310 | + Pectinesterase. | ||
PLN02665 | PLN02665 | 1.0e-97 | 2 | 297 | 304 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 4.0e-100 | 1 | 305 | 307 | + putative pectinesterase | ||
PLN02682 | PLN02682 | 1.0e-109 | 13 | 305 | 300 | + pectinesterase family protein | ||
PLN02773 | PLN02773 | 0 | 1 | 317 | 317 | + pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABN08265.1 | 0 | 9 | 317 | 8 | 316 | Pectinesterase [Medicago truncatula] |
RefSeq | NP_566842.1 | 0 | 1 | 317 | 1 | 317 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002283941.1 | 0 | 4 | 317 | 3 | 316 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305315.1 | 0 | 4 | 317 | 3 | 316 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002530008.1 | 0 | 5 | 317 | 4 | 316 | Pectinesterase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 7 | 278 | 9 | 281 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 5.60519e-45 | 9 | 309 | 7 | 297 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 6e-25 | 17 | 292 | 18 | 330 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 6e-25 | 17 | 292 | 18 | 330 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 6e-25 | 17 | 292 | 18 | 330 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EG480743 | 273 | 1 | 273 | 0 |
GR994392 | 302 | 4 | 305 | 0 |
DY292729 | 299 | 4 | 302 | 0 |
DY292725 | 307 | 4 | 310 | 0 |
ES794113 | 289 | 3 | 291 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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