y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.009G272700.1 |
Family | CE8 |
Protein Properties | Length: 333 Molecular Weight: 36491.2 Isoelectric Point: 9.2431 |
Chromosome | Chromosome/Scaffold: 09 Start: 22786007 End: 22795541 |
Description | pectinesterase 11 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 34 | 305 | 0 |
VDQSGKGDYEKIQDAIDAVPSNNKEVVFILVNPGIYHEKIVVPTDKPFITLSGSKPNDTVITGSDSGNIFESATFTVLASDFVGRYLTIQNTRGAGAKAV ALRVSGDRAAFFGCRILSYQDTLLDDTGRHYYSNCYIKGAVDFIFGNAASLFERCHLHTLSEGGASITAQRRELPSEETGFTFQGCKITGVRTAALGRPW GPYSRVIFALTYMSNVILPQGWDDWGDSSKQSTVFYREYKCHGPGANNRKRVEWSQQLTTKEAEIFLTKNMI |
Full Sequence |
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Protein Sequence Length: 333 Download |
MAAFIFYVTL FTLMASTSRA DTAQTSAAAL LLRVDQSGKG DYEKIQDAID AVPSNNKEVV 60 FILVNPGIYH EKIVVPTDKP FITLSGSKPN DTVITGSDSG NIFESATFTV LASDFVGRYL 120 TIQNTRGAGA KAVALRVSGD RAAFFGCRIL SYQDTLLDDT GRHYYSNCYI KGAVDFIFGN 180 AASLFERCHL HTLSEGGASI TAQRRELPSE ETGFTFQGCK ITGVRTAALG RPWGPYSRVI 240 FALTYMSNVI LPQGWDDWGD SSKQSTVFYR EYKCHGPGAN NRKRVEWSQQ LTTKEAEIFL 300 TKNMIGGKSW IRSTPKRFKK ASSAISSNST TH* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02671 | PLN02671 | 2.0e-89 | 34 | 312 | 296 | + pectinesterase | ||
PLN02773 | PLN02773 | 1.0e-91 | 26 | 305 | 298 | + pectinesterase | ||
PLN02665 | PLN02665 | 4.0e-102 | 11 | 316 | 318 | + pectinesterase family protein | ||
PLN02682 | PLN02682 | 5.0e-115 | 29 | 312 | 301 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 0 | 29 | 312 | 284 | + putative pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN79458.1 | 0 | 12 | 325 | 28 | 339 | hypothetical protein [Vitis vinifera] |
EMBL | CBI19714.1 | 0 | 1 | 329 | 86 | 418 | unnamed protein product [Vitis vinifera] |
EMBL | CBI37658.1 | 0 | 12 | 329 | 46 | 361 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002280496.1 | 0 | 27 | 329 | 2 | 304 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002281308.1 | 0 | 1 | 329 | 29 | 361 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 34 | 314 | 11 | 311 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 34 | 314 | 7 | 307 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 1e-21 | 25 | 315 | 2 | 342 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 1e-21 | 25 | 315 | 2 | 342 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 1e-21 | 25 | 315 | 2 | 342 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |