y
Basic Information | |
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Species | Prunus persica |
Cazyme ID | ppa024542m |
Family | CE8 |
Protein Properties | Length: 302 Molecular Weight: 34014.5 Isoelectric Point: 7.4921 |
Chromosome | Chromosome/Scaffold: 6 Start: 20471696 End: 20473031 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 1 | 285 | 0 |
MVDKSGRGNFTTVQQAIDSIPSNNSLWTRILINHGLYMEKVVIPRNKPYIILEGDPRHDTAIEYGDFGSVIDSPTFKLFADNFVARNIIFKVKIHNSYDR LITPGPNGRKTTWAPAASISGDKASFYHCAFISLQDTLRDDVGRHYYYDCFVEGAIDFIWGNGQSIYEKCQLRSVTDKIGVPGFITAQGRKGLKETSGYV FKDCYVNGTGPIFLGRPYRDYSRVLFASTYMENIITPEGWSAWEKRSLDLITFSEVNCKGPGADMSHRIPWEKKLSDQEVAYLTN |
Full Sequence |
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Protein Sequence Length: 302 Download |
MVDKSGRGNF TTVQQAIDSI PSNNSLWTRI LINHGLYMEK VVIPRNKPYI ILEGDPRHDT 60 AIEYGDFGSV IDSPTFKLFA DNFVARNIIF KVKIHNSYDR LITPGPNGRK TTWAPAASIS 120 GDKASFYHCA FISLQDTLRD DVGRHYYYDC FVEGAIDFIW GNGQSIYEKC QLRSVTDKIG 180 VPGFITAQGR KGLKETSGYV FKDCYVNGTG PIFLGRPYRD YSRVLFASTY MENIITPEGW 240 SAWEKRSLDL ITFSEVNCKG PGADMSHRIP WEKKLSDQEV AYLTNPASFI DQEGWLGKQP 300 N* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02304 | PLN02304 | 3.0e-86 | 2 | 296 | 305 | + probable pectinesterase | ||
PLN02665 | PLN02665 | 1.0e-87 | 2 | 301 | 308 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 1.0e-88 | 2 | 296 | 297 | + putative pectinesterase | ||
PLN02682 | PLN02682 | 8.0e-90 | 2 | 296 | 307 | + pectinesterase family protein | ||
PLN02497 | PLN02497 | 4.0e-113 | 1 | 300 | 303 | + probable pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN79494.1 | 0 | 2 | 300 | 34 | 327 | hypothetical protein [Vitis vinifera] |
EMBL | CBI40838.1 | 0 | 2 | 300 | 47 | 341 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002263748.1 | 0 | 2 | 300 | 34 | 328 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002512520.1 | 0 | 2 | 285 | 35 | 316 | Pectinesterase-2 precursor, putative [Ricinus communis] |
RefSeq | XP_002518106.1 | 0 | 1 | 300 | 49 | 335 | Pectinesterase U1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 5.99994e-41 | 1 | 296 | 10 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 5e-34 | 1 | 296 | 6 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 0.00000000000004 | 10 | 284 | 18 | 329 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 0.00000000000004 | 10 | 284 | 18 | 329 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 0.00000000000004 | 10 | 284 | 18 | 329 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EX687561 | 213 | 2 | 213 | 0 |
CO901270 | 151 | 82 | 232 | 0 |
DV984237 | 297 | 9 | 296 | 0 |
EX315894 | 282 | 24 | 296 | 0 |
EX317112 | 281 | 25 | 296 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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