y
Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10003919m |
Family | CE8 |
Protein Properties | Length: 568 Molecular Weight: 62487.3 Isoelectric Point: 8.561 |
Chromosome | Chromosome/Scaffold: 6 Start: 4713843 End: 4715994 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 255 | 550 | 0 |
NVVVAQDGSGQYKSIDEALKAVPQNNRWPFVIYIKQGIYKENVDVTKKMTHVTFIGDGPTRTKITGNLNFRIGKVKTYQTATVAINGDNFTAKNIGFENT AGPEGHQAVALRVSADYAVFHNCQMDGYQDTLYVHAHRQFYRDCTISGTVDFIFGDAKSLFQNCNIVVRKPMGGQSCIVTAQGRTDVRESTGIVLHNCRI TGEPAYIPVKAVNKAYLGRPWKVFSRTIVMMTNIDNVIDPAGWLPWDGDFALNTLYYAEYQNSGPGSNQAQRVNWAGIKNISPRQALKFTPARFLR |
Full Sequence |
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Protein Sequence Length: 568 Download |
MGFGGDNKKK KGIIAGAISA LLVVMVVSVA VIVSKDCKAS DKIKTTTKAV QAVCSPTDFK 60 DTCVNSLMEA SPNSTEPLDL IKLSFDVTIR SIKDGIKRSS TELKAKAAKD EETKGALELC 120 ENLMNDATDD LKKCFDNFDG FSITQIEDFV EDLRVWLSGS IAYQQTCMDT FEEVKSNLAQ 180 DMKNIFKTSK ELTSNSLAMI TDLSILLGKV NITEVTGDLG NYARKLLSTE EGIPSWVGTN 240 TRRLMAATQG GVKANVVVAQ DGSGQYKSID EALKAVPQNN RWPFVIYIKQ GIYKENVDVT 300 KKMTHVTFIG DGPTRTKITG NLNFRIGKVK TYQTATVAIN GDNFTAKNIG FENTAGPEGH 360 QAVALRVSAD YAVFHNCQMD GYQDTLYVHA HRQFYRDCTI SGTVDFIFGD AKSLFQNCNI 420 VVRKPMGGQS CIVTAQGRTD VRESTGIVLH NCRITGEPAY IPVKAVNKAY LGRPWKVFSR 480 TIVMMTNIDN VIDPAGWLPW DGDFALNTLY YAEYQNSGPG SNQAQRVNWA GIKNISPRQA 540 LKFTPARFLR GNLWIPQTHV PYTPNMQ* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02468 | PLN02468 | 1.0e-173 | 38 | 566 | 532 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02990 | PLN02990 | 0 | 42 | 567 | 526 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN02217 | PLN02217 | 0 | 36 | 566 | 531 | + probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 255 | 552 | 299 | + Pectinesterase. | ||
PLN02745 | PLN02745 | 0 | 35 | 561 | 539 | + Putative pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAF63815.1 | 0 | 41 | 563 | 42 | 559 | pectin methylesterase, putative [Arabidopsis thaliana] |
DDBJ | BAC42959.2 | 0 | 41 | 563 | 42 | 565 | putative pectin methylesterase [Arabidopsis thaliana] |
RefSeq | NP_187339.2 | 0 | 41 | 563 | 42 | 565 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | NP_199729.1 | 0 | 1 | 567 | 1 | 571 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002314364.1 | 0 | 42 | 566 | 52 | 568 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 252 | 563 | 5 | 316 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 252 | 566 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 1e-31 | 255 | 556 | 5 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 1e-31 | 255 | 556 | 5 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 1e-31 | 255 | 556 | 5 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |