y
Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr5g083590.1 |
Family | CE8 |
Protein Properties | Length: 265 Molecular Weight: 29931.5 Isoelectric Point: 6.9421 |
Chromosome | Chromosome/Scaffold: 5 Start: 35057651 End: 35059522 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 4 | 208 | 0 |
NGTGQYKIVYEGINSYPKNYQGRYIIYVKASIYQEYVVVDDSKNNIILHDDDPTTKIITGRKNQHEGTKIPQTTTFDTFSQNFIAKSITFENTDHSSFFN CEFRGYQDTLYVDQGYQFYRNCKTYGTIDFIYGHSTTLIQNSTILVRKPALGQSNVVVADVTNINTNLSTDIVLQNYSISPNVELTPFPPTVKTYLARPW QAFST |
Full Sequence |
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Protein Sequence Length: 265 Download |
MTLNGTGQYK IVYEGINSYP KNYQGRYIIY VKASIYQEYV VVDDSKNNII LHDDDPTTKI 60 ITGRKNQHEG TKIPQTTTFD TFSQNFIAKS ITFENTDHSS FFNCEFRGYQ DTLYVDQGYQ 120 FYRNCKTYGT IDFIYGHSTT LIQNSTILVR KPALGQSNVV VADVTNINTN LSTDIVLQNY 180 SISPNVELTP FPPTVKTYLA RPWQAFSTFG NIGPGANATT RVKWEKVIIT RDETVKFTAE 240 PWIGASTWLN STGIAYDRGF MAET* 300 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02314 | PLN02314 | 2.0e-57 | 4 | 257 | 305 | + pectinesterase | ||
PLN02468 | PLN02468 | 2.0e-58 | 4 | 260 | 306 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02197 | PLN02197 | 5.0e-61 | 4 | 254 | 301 | + pectinesterase | ||
PLN02745 | PLN02745 | 8.0e-64 | 4 | 253 | 299 | + Putative pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 1.0e-75 | 5 | 246 | 292 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABO80921.1 | 0 | 4 | 262 | 22 | 334 | Pectinesterase [Medicago truncatula] |
GenBank | ABO80924.1 | 0 | 4 | 262 | 264 | 576 | Pectinesterase; Pectinesterase inhibitor [Medicago truncatula] |
GenBank | ABO80928.1 | 0 | 4 | 262 | 264 | 576 | Pectinesterase; Pectinesterase inhibitor [Medicago truncatula] |
EMBL | CBI26012.1 | 0 | 1 | 260 | 259 | 567 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002275000.1 | 0 | 1 | 260 | 259 | 567 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 1 | 260 | 11 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 2e-38 | 4 | 260 | 10 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 0.000000000006 | 9 | 211 | 18 | 253 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 0.000000000006 | 9 | 211 | 18 | 253 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 0.000000000006 | 9 | 211 | 18 | 253 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
BM527181 | 183 | 40 | 207 | 0 |
BM527628 | 173 | 8 | 165 | 0 |
AW395891 | 164 | 4 | 152 | 0 |
JG075711 | 299 | 5 | 253 | 0 |
JG074639 | 297 | 7 | 253 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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