y
Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10015933m |
Family | CE8 |
Protein Properties | Length: 569 Molecular Weight: 61581.7 Isoelectric Point: 8.6236 |
Chromosome | Chromosome/Scaffold: 3 Start: 2188452 End: 2190323 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 258 | 551 | 0 |
AVVAQDGSGQFKTIADALNAVPKGNTVPFVIHIKQGIYKEKVIVTRKMPYVTFIGDGPNKTVITGSLNFGIGKVKTFLTGSITIEGDHFTAKNIGIENTA GPEGGQAVALRVSADYAAFQSCQIDGHQDTLYVHSHRQFYRDCTVSGTVDFIFGDAKCILQNCKIVVRKPKKGQSCMVTAQGRSNVRESTGLVLHNCHIT GDSAYIPVKSESKAYLGRPWKEFSRTIVMKTAIDDVIDPAGWLPWSGDFALKTLYYAEHLNTGPGSNQAHRVKWPGIKKLTPQDALLYTGDKFL |
Full Sequence |
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Protein Sequence Length: 569 Download |
MGFDGDKKKK CIIAGSVSGL LVIMVVSVAV VTSKHSPKAE ENQIKKTTKA VQAVCAPTDF 60 KETCVNSLMS ASPKSAEPLD LIKLGFDVTI KSINEGLKKA SGDIKAKAGK DPDAKGAFEL 120 CEKLMVDAIE DLKKCMDHGF SVDRVEVFVE DLRVWLSGSI AFQQTCMDSF EEIKSNLMQD 180 MQNIFQTSKE LSSNSLAMVS SMSTLFPSSN DTGLTGTLTN YARKLLSAED GIPTWVRPEA 240 RRLLAAQGGG PGPVKANAVV AQDGSGQFKT IADALNAVPK GNTVPFVIHI KQGIYKEKVI 300 VTRKMPYVTF IGDGPNKTVI TGSLNFGIGK VKTFLTGSIT IEGDHFTAKN IGIENTAGPE 360 GGQAVALRVS ADYAAFQSCQ IDGHQDTLYV HSHRQFYRDC TVSGTVDFIF GDAKCILQNC 420 KIVVRKPKKG QSCMVTAQGR SNVRESTGLV LHNCHITGDS AYIPVKSESK AYLGRPWKEF 480 SRTIVMKTAI DDVIDPAGWL PWSGDFALKT LYYAEHLNTG PGSNQAHRVK WPGIKKLTPQ 540 DALLYTGDKF LGGETWIPQT QVPYTANM* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02468 | PLN02468 | 1.0e-144 | 11 | 564 | 557 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02217 | PLN02217 | 3.0e-168 | 2 | 568 | 582 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02745 | PLN02745 | 7.0e-177 | 32 | 563 | 555 | + Putative pectinesterase/pectinesterase inhibitor | ||
PLN02990 | PLN02990 | 0 | 1 | 568 | 575 | + Probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 257 | 554 | 299 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAF63815.1 | 0 | 1 | 568 | 1 | 562 | pectin methylesterase, putative [Arabidopsis thaliana] |
DDBJ | BAC42959.2 | 0 | 1 | 566 | 1 | 566 | putative pectin methylesterase [Arabidopsis thaliana] |
RefSeq | NP_187339.2 | 0 | 1 | 568 | 1 | 568 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | NP_199729.1 | 0 | 33 | 568 | 37 | 570 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002314364.1 | 0 | 34 | 568 | 46 | 568 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 254 | 564 | 1 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 254 | 568 | 5 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_B | 2e-33 | 257 | 558 | 5 | 339 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_A | 2e-33 | 257 | 558 | 5 | 339 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntp_B | 2e-33 | 257 | 558 | 5 | 339 | A Chain A, Pectin Methylesterase From Carrot |