y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00019846m |
Family | CE8 |
Protein Properties | Length: 795 Molecular Weight: 86597.5 Isoelectric Point: 6.9446 |
Chromosome | Chromosome/Scaffold: 028384 Start: 3138 End: 6011 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 482 | 776 | 0 |
AVVAQDGSGGFKTITAAINAVPKTYQGRYVIYVKAGTYKEYVTIPKNMANIFMYGDGPTKTVVTGDKSNTGGFATIATRTFSAEGNGFICKNMGFVNTAG PDGHQAVALHVQGDMSVFFNCRFEGYQDTLYVHANRQFFRNCEVLGTIDFIFGNSAALFQNCLMTVRKPGISQSNMVTAQGRTDPNMPTGIVLQSCRIVP EQALFPDRLKVASYLGRPWKEYARTVIMESTIGDLIKPEGWSEWMGDIGLKTLYYAEYGNTGPGAGTSKRVNWPGYRGVIGQAEATQFTAGVFID |
Full Sequence |
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Protein Sequence Length: 795 Download |
MANKIAVASV IAAVGIVAVI GTIAAVTASK KGGDKDGGGM SAGVKLSTVC ASTLYPEKCE 60 QSLKPVVNDT SNPEDVLRAA LNVALDEVAA AFERSEHIGK GAKDNITRNA MDVCKKLLDD 120 ATEDLRDMAR LKPVEVLDHV KDLRVWLSGV MTYVYTCADG FEMPELKEAM DKVLQNSTEL 180 SSNALAIITR LGELLPEEAK KVNATAAAAA GHGRRLLGWR MREAEEKTSG RGVPAADGKL 240 NEIADVTDAS RQLLADTLDE ISALSDDASR RQLGLMFAKL YSRGAKGDLL WRRRHLLTMS 300 LSVMTDEGEE QRIHMNHHLD AIANMSTETN RQLLAEELPD DLDGRRQLLS RRLVGISEVA 360 GEAKRQLEAM DQPADDHHRV LMTTNLVGTF DEIEDGRSGL KSSDLPKSAP ANQRRRLMQL 420 PGGRKQPSRN RLLTTDVIGT PDEIEDDARS RSGWKEQSGD DAPKWVPGDL RRLLLQIQKP 480 NAVVAQDGSG GFKTITAAIN AVPKTYQGRY VIYVKAGTYK EYVTIPKNMA NIFMYGDGPT 540 KTVVTGDKSN TGGFATIATR TFSAEGNGFI CKNMGFVNTA GPDGHQAVAL HVQGDMSVFF 600 NCRFEGYQDT LYVHANRQFF RNCEVLGTID FIFGNSAALF QNCLMTVRKP GISQSNMVTA 660 QGRTDPNMPT GIVLQSCRIV PEQALFPDRL KVASYLGRPW KEYARTVIME STIGDLIKPE 720 GWSEWMGDIG LKTLYYAEYG NTGPGAGTSK RVNWPGYRGV IGQAEATQFT AGVFIDAMTW 780 LKATGTPNVM GFTK* 840 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02301 | PLN02301 | 6.0e-5 | 46 | 188 | 147 | + pectinesterase/pectinesterase inhibitor | ||
PLN02745 | PLN02745 | 3.0e-23 | 46 | 195 | 156 | + Putative pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 2.0e-133 | 461 | 785 | 328 | + pectinesterase/pectinesterase inhibitor | ||
PLN02745 | PLN02745 | 7.0e-159 | 460 | 791 | 336 | + Putative pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 481 | 778 | 298 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAC09455.2 | 0 | 263 | 794 | 226 | 717 | H0423H10.1 [Oryza sativa (indica cultivar-group)] |
EMBL | CAH68135.1 | 0 | 38 | 428 | 35 | 432 | B0414F07.5 [Oryza sativa (indica cultivar-group)] |
EMBL | CAH68135.1 | 0 | 263 | 794 | 480 | 971 | B0414F07.5 [Oryza sativa (indica cultivar-group)] |
RefSeq | NP_001145377.1 | 0 | 34 | 794 | 30 | 727 | hypothetical protein LOC100278720 [Zea mays] |
RefSeq | XP_002447200.1 | 0 | 30 | 794 | 30 | 739 | hypothetical protein SORBIDRAFT_06g030310 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 481 | 792 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 480 | 791 | 7 | 318 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1qjv_B | 2e-25 | 481 | 770 | 5 | 329 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 2e-25 | 481 | 770 | 5 | 329 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 4e-25 | 481 | 770 | 5 | 329 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |