y
Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10000415m |
Family | CE8 |
Protein Properties | Length: 728 Molecular Weight: 81846.9 Isoelectric Point: 9.8715 |
Chromosome | Chromosome/Scaffold: 5 Start: 33642731 End: 33648714 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 285 | 580 | 0 |
DVVVAKDGSGNCTTINEALNFIPKKSNKTTTIYIKEGIYQEKVYLNRSMARVFMIGDGMYKTRITGNLNYVDGTPTMHTATVSILGEFFMAKNIGFENSA GPEKHQAVALRVDADMSIFYNCSMDGYQDTLYTHAKRQYYRDCTITGTIDFIFGDGSAFFQNCKIIVRKPLDNQHCIVTAQGRNVTHQPTAIVIQNSSII ADHVYWPVRNKIKSYLGRPWRIHSRTVIMETFIDDLIQPQGWLPWEGEFGIHTCFYAEYGNYGPGANKTGRVTWQGVKSIDRLEEAFEFTAGKFFD |
Full Sequence |
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Protein Sequence Length: 728 Download |
MHQEDVEKIG KNRIAFVMFA SIFLVVMVVV ATVSIGRRPN NGKSEVDVSS QSHDQVSASM 60 KAIKTVCQPT DYQKQCVESL QTESGNTTDP KELIRAAFQV AKKHVAAAAK RSRTLKQLEK 120 DPRASLALED CNELMDEAIE DLQRSFEELG KSDHQARYKM GPMINNLKTW LSSTITYQET 180 CLDGFANTTG EAGVKMREIL KTSIELTINA IAMVSKISSI LGNLDINREI NLGSSHHRGL 240 IENNAKVLGH GGIHVLEHGD LYPSWLGPRN RKLLGLIDQA QFKPDVVVAK DGSGNCTTIN 300 EALNFIPKKS NKTTTIYIKE GIYQEKVYLN RSMARVFMIG DGMYKTRITG NLNYVDGTPT 360 MHTATVSILG EFFMAKNIGF ENSAGPEKHQ AVALRVDADM SIFYNCSMDG YQDTLYTHAK 420 RQYYRDCTIT GTIDFIFGDG SAFFQNCKII VRKPLDNQHC IVTAQGRNVT HQPTAIVIQN 480 SSIIADHVYW PVRNKIKSYL GRPWRIHSRT VIMETFIDDL IQPQGWLPWE GEFGIHTCFY 540 AEYGNYGPGA NKTGRVTWQG VKSIDRLEEA FEFTAGKFFD GDDWIKPRGH PRWRLHRPLC 600 PRTLQIRPRL TRHHPLTVVA VAVAAETEKE TESPSRSVKS RGLKQNDVAG ATTPPILILP 660 NLIPPEATIL PTVSMKVIQR GTRRVTDQRR PRKRTGARVI DINVINRKLK RRRKMREVVA 720 LYSFRSS* 780 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02314 | PLN02314 | 2.0e-161 | 3 | 585 | 594 | + pectinesterase | ||
PLN02990 | PLN02990 | 4.0e-170 | 21 | 591 | 575 | + Probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 1.0e-177 | 285 | 582 | 298 | + Pectinesterase. | ||
PLN02217 | PLN02217 | 0 | 11 | 591 | 583 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02745 | PLN02745 | 0 | 61 | 591 | 536 | + Putative pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI39537.1 | 0 | 55 | 591 | 51 | 569 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002279123.1 | 0 | 55 | 591 | 51 | 569 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002318979.1 | 0 | 40 | 591 | 38 | 569 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002330222.1 | 0 | 40 | 591 | 38 | 570 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002512459.1 | 0 | 40 | 591 | 38 | 574 | Pectinesterase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 285 | 589 | 4 | 308 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 284 | 591 | 7 | 314 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1qjv_B | 1e-22 | 285 | 550 | 5 | 311 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 1e-22 | 285 | 550 | 5 | 311 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 1e-22 | 285 | 550 | 5 | 311 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |