y
Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 477851 |
Family | CE8 |
Protein Properties | Length: 672 Molecular Weight: 72859.5 Isoelectric Point: 6.2714 |
Chromosome | Chromosome/Scaffold: 3 Start: 2118230 End: 2120722 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 255 | 550 | 0 |
DIVVAQDGSGQYTTINEALQFVPKKKNTTFVVHIKAGLYKEYVQVNKSMTHLVFIGDGPDKTIISGNKNYKDGITTYRTATVAIVGNYFIAKNIGFENTA GAIKHQAVALRVQSDESIFFNCRFDGYQDTLYTHSHRQFFRDCTISGTIDFLFGDAAAVFQNCTLLVRKPLPNQACPITAHGRKDPREVTGFVFQGCTIA GEPDYLAVKETSKAYLGRPWKEYSRTIIMNTFIPDFVQPQGWQPWLGDFGLKTLFYSEVQNTGPGSALANRVTWAGIKTLSDEDILKFTPAQYIQG |
Full Sequence |
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Protein Sequence Length: 672 Download |
MSYGYDDEAK RKRRYVVITI SSVLLISMVV AVTVGVSLNK NDGDSEGKGE ITASVKAVKD 60 VCAPTDYRKT CEDTLIKNGK NTTDPMELVK TAFSVTMKQI TDAAKKSQTM MELQKDPRTR 120 MALDQCKELM DYALGELSNS FEELGKFEFH LLDEALINLR IWLSAAISHE ETCLEGFQGT 180 QGNAGETMKK ALKTAIELTH NGLAIISEMS NFVGQMQIPG LNSRRLLAEG FPSWLDQRGR 240 KLLQAAAAYS DVKPDIVVAQ DGSGQYTTIN EALQFVPKKK NTTFVVHIKA GLYKEYVQVN 300 KSMTHLVFIG DGPDKTIISG NKNYKDGITT YRTATVAIVG NYFIAKNIGF ENTAGAIKHQ 360 AVALRVQSDE SIFFNCRFDG YQDTLYTHSH RQFFRDCTIS GTIDFLFGDA AAVFQNCTLL 420 VRKPLPNQAC PITAHGRKDP REVTGFVFQG CTIAGEPDYL AVKETSKAYL GRPWKEYSRT 480 IIMNTFIPDF VQPQGWQPWL GDFGLKTLFY SEVQNTGPGS ALANRVTWAG IKTLSDEDIL 540 KFTPAQYIQG DTWVPGKGVP YTPGLLAGNP AAATTTPSGS AAPGFSTFTD TSGADSIAPA 600 ASPESSLAPE SSIKIASSET ASPESSIKVA STETASPESS IKVASTETAS PESSIKVAST 660 ESSVSMVSMS T* 720 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02314 | PLN02314 | 8.0e-167 | 2 | 561 | 586 | + pectinesterase | ||
PLN02217 | PLN02217 | 0 | 1 | 658 | 661 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02990 | PLN02990 | 0 | 4 | 561 | 570 | + Probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 255 | 551 | 298 | + Pectinesterase. | ||
PLN02745 | PLN02745 | 0 | 9 | 560 | 587 | + Putative pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 250 | 565 | 3 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 257 | 565 | 6 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 5e-21 | 265 | 543 | 43 | 353 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 1qjv_B | 1e-17 | 266 | 555 | 18 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 1e-17 | 266 | 555 | 18 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |