y
Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10027546m |
Family | CE8 |
Protein Properties | Length: 572 Molecular Weight: 63145.5 Isoelectric Point: 8.5613 |
Chromosome | Chromosome/Scaffold: 8 Start: 5801172 End: 5803071 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 259 | 554 | 0 |
NVVVAQDGSGQYKTINEALNLVPKANQNPFVIYIKQGVYNEKVNVTKKMTHVTFIGDGPTKTKITGSLNYHIGKVKTYHTATVAVNGDNFTAKNIGFENT AGPEGHQAVALRVSADYAVFHNCQIDGYQDTLYVHSHRQFYRDCTISGTVDFIFGDGKVVLQNCNIVVRKPMKNQSCMITAQGRTDVRESTGLVLHNCHI MGEPEYIPVKSINKAYLGRPWKEFSRTIIMRTNIDNVIDPAGWLPWDGDFALSTLYYAEFENTGPGSDQSQRVKWPGIKKLSPKQALRFTPARFLR |
Full Sequence |
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Protein Sequence Length: 572 Download |
MGIDGELKKK KCIIAGIITA LLVVMVIAVA IIMSRNTIGS ETIAGVQIKT TTKAVQEVCA 60 PTDYKETCVN SLMKASPDST QPLELIKLGF NITIQSIKDS IKKASEELKA KAAKDNETKD 120 ALELCESLMT DATDDLKKCL DNFDGFSITH IEDLVEDLRV WLSGSIAYQQ TCMDTFDEIN 180 SNLSQDMHKI FKTSKELTSN GLAMITSISS FLGGFNMTGL TGDLGHYARK LLSTKDGIPS 240 WVGPNTRRLM ATQGVVKPNV VVAQDGSGQY KTINEALNLV PKANQNPFVI YIKQGVYNEK 300 VNVTKKMTHV TFIGDGPTKT KITGSLNYHI GKVKTYHTAT VAVNGDNFTA KNIGFENTAG 360 PEGHQAVALR VSADYAVFHN CQIDGYQDTL YVHSHRQFYR DCTISGTVDF IFGDGKVVLQ 420 NCNIVVRKPM KNQSCMITAQ GRTDVRESTG LVLHNCHIMG EPEYIPVKSI NKAYLGRPWK 480 EFSRTIIMRT NIDNVIDPAG WLPWDGDFAL STLYYAEFEN TGPGSDQSQR VKWPGIKKLS 540 PKQALRFTPA RFLRGNLWIP PNRVPYMGNL Q* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02468 | PLN02468 | 3.0e-170 | 44 | 566 | 525 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02990 | PLN02990 | 0 | 1 | 571 | 572 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN02217 | PLN02217 | 0 | 47 | 570 | 525 | + probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 259 | 556 | 299 | + Pectinesterase. | ||
PLN02745 | PLN02745 | 0 | 53 | 559 | 520 | + Putative pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAF63815.1 | 0 | 47 | 570 | 43 | 562 | pectin methylesterase, putative [Arabidopsis thaliana] |
DDBJ | BAC42959.2 | 0 | 47 | 566 | 43 | 564 | putative pectin methylesterase [Arabidopsis thaliana] |
RefSeq | NP_187339.2 | 0 | 47 | 570 | 43 | 568 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | NP_199729.1 | 0 | 1 | 571 | 1 | 571 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002314364.1 | 0 | 47 | 570 | 52 | 568 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 256 | 566 | 5 | 315 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 259 | 570 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 2e-33 | 259 | 560 | 5 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 2e-33 | 259 | 560 | 5 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 3e-33 | 259 | 560 | 5 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |