y
Basic Information | |
---|---|
Species | Glycine max |
Cazyme ID | Glyma10g27700.1 |
Family | CE8 |
Protein Properties | Length: 575 Molecular Weight: 62603.8 Isoelectric Point: 6.6278 |
Chromosome | Chromosome/Scaffold: 10 Start: 36460928 End: 36464091 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE8 | 263 | 555 | 0 |
AVVAKDGSGQYKTVLDAINSYPKNHKGRYVIYVKAGVYDEYITVDKKKPNILIYGDGPTKTIITGSKNMKDGVKTMRTATFATVAEDFIAKSMAFENTAG ARGHQAVALRVQGDRSAFFDCAIHGYQDTLYAHAHRQFYRNCEISGTVDFIFGYGTTLIQSSKLIVRKPDPNQQNIVVADGTDQKNMPTGVVLQNCEIIP EAALVPDKMKFRSYLARPWKAYSRAILMENTIGDFIQPDGFLPWNGNLYLDTCFFAEYANTGMGADTQRRVKWSRGVLNKADATKYTADQWLQ |
Full Sequence |
---|
Protein Sequence Length: 575 Download |
MEKKATLVSA VSLILVVGVA LGVVAYVSTN NSGSDNSESN DSGQVSTHTK AVQAVCQNSD 60 DKKFCSDTLS SVNTSDPTAY VKTVLKKTMD GVIKAFNLSD TLTVEHSKTN SSVKMALEDC 120 KDLLDFAIDE LQASQVLVKD NNVNNINDGV SDLKNWIGAV VAYQQSCLDG FDTDAEKEVQ 180 SKLQTGGLDS MGKLTALALD VISSFAELLS GFNLNLTTSV KPPTSSSRRL LDVDQDGYPS 240 WISMPDRKLL ADAKKGDSVP PNAVVAKDGS GQYKTVLDAI NSYPKNHKGR YVIYVKAGVY 300 DEYITVDKKK PNILIYGDGP TKTIITGSKN MKDGVKTMRT ATFATVAEDF IAKSMAFENT 360 AGARGHQAVA LRVQGDRSAF FDCAIHGYQD TLYAHAHRQF YRNCEISGTV DFIFGYGTTL 420 IQSSKLIVRK PDPNQQNIVV ADGTDQKNMP TGVVLQNCEI IPEAALVPDK MKFRSYLARP 480 WKAYSRAILM ENTIGDFIQP DGFLPWNGNL YLDTCFFAEY ANTGMGADTQ RRVKWSRGVL 540 NKADATKYTA DQWLQANTWL PATGIPFDLG LTKA* 600 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02468 | PLN02468 | 2.0e-137 | 51 | 571 | 532 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02217 | PLN02217 | 3.0e-140 | 44 | 571 | 535 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02990 | PLN02990 | 1.0e-141 | 44 | 567 | 533 | + Probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 1.0e-160 | 262 | 557 | 298 | + Pectinesterase. | ||
PLN02745 | PLN02745 | 0 | 44 | 571 | 542 | + Putative pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABO80924.1 | 0 | 44 | 571 | 34 | 574 | Pectinesterase; Pectinesterase inhibitor [Medicago truncatula] |
GenBank | ABO80928.1 | 0 | 44 | 571 | 34 | 574 | Pectinesterase; Pectinesterase inhibitor [Medicago truncatula] |
GenBank | ABO80933.1 | 0 | 44 | 556 | 34 | 562 | Pectinesterase; Pectinesterase inhibitor [Medicago truncatula] |
RefSeq | XP_002298186.1 | 0 | 31 | 573 | 29 | 559 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002303172.1 | 0 | 30 | 573 | 29 | 560 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 258 | 571 | 4 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 262 | 571 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 1e-25 | 262 | 561 | 5 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 1e-25 | 262 | 561 | 5 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 1e-25 | 262 | 561 | 5 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |