y
Basic Information | |
---|---|
Species | Medicago truncatula |
Cazyme ID | Medtr4g005180.1 |
Family | CE8 |
Protein Properties | Length: 615 Molecular Weight: 69104.1 Isoelectric Point: 8.2079 |
Chromosome | Chromosome/Scaffold: 4 Start: 243749 End: 246414 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE8 | 243 | 541 | 0 |
NVTVALDGSGDFKSINEALKKVPGEEDETPFVIYIKEGVYREYVEVLKNMTHIVFVGDGGKKSIITGNKNYMDGVTTYHTTTVAIQEDHFTAINMGFENS AGPQKHQAVALRVQGDKAIFFNCSMDGYQDTLYVHAMRQFYRDCTISGTIDFVFGNAESVFQNCKFVVRKPMSNQQCIVTAQGRKEITAPSAIVIQGGSI VADPEFYPVRFDHKSYLACPWKNFSRTIIMDTFIDDLIHPDGFLPWHTEEGPINMDTCYYVEYHNYGPGSDKSKRVKWAGIYNINTKAAQKFAPSKFFH |
Full Sequence |
---|
Protein Sequence Length: 615 Download |
MLLLVAMVVA VTISIKQNQN DVKDDFKDDL ADNKKNHVAS TLKAVQTICH PTTYKKECVE 60 SLVVEAEAGN VTDPKELIKI AFNVTINKIG EKLKETEMFS EIEKDSRSKD ALDTCKQLMH 120 LSIGEFTRSL DGISEFDLKH MNQILMNLKV WLNGAVTYMD TCLDGFENTT GDASKKMKHL 180 LTSSIHMSSN VLAIVSNFAD TVSDMNVSKL FGRCLLQDSE IPSWVEHRIL LDAMTNKSKP 240 KPNVTVALDG SGDFKSINEA LKKVPGEEDE TPFVIYIKEG VYREYVEVLK NMTHIVFVGD 300 GGKKSIITGN KNYMDGVTTY HTTTVAIQED HFTAINMGFE NSAGPQKHQA VALRVQGDKA 360 IFFNCSMDGY QDTLYVHAMR QFYRDCTISG TIDFVFGNAE SVFQNCKFVV RKPMSNQQCI 420 VTAQGRKEIT APSAIVIQGG SIVADPEFYP VRFDHKSYLA CPWKNFSRTI IMDTFIDDLI 480 HPDGFLPWHT EEGPINMDTC YYVEYHNYGP GSDKSKRVKW AGIYNINTKA AQKFAPSKFF 540 HGGDWIKDTG IPYYPNIPEH KKHEKTVLLR GPKNAREAVK HFGRAPGVPQ SHTKPYVRGK 600 SRKIEKARRK QKVS* 660 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02314 | PLN02314 | 7.0e-143 | 39 | 553 | 536 | + pectinesterase | ||
PLN02745 | PLN02745 | 7.0e-167 | 43 | 552 | 523 | + Putative pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 4.0e-167 | 243 | 542 | 301 | + Pectinesterase. | ||
PLN02990 | PLN02990 | 2.0e-179 | 37 | 557 | 533 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN02217 | PLN02217 | 0 | 38 | 557 | 522 | + probable pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI39537.1 | 0 | 34 | 553 | 48 | 570 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002279123.1 | 0 | 34 | 553 | 48 | 570 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002318979.1 | 0 | 36 | 555 | 53 | 572 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002330222.1 | 0 | 24 | 555 | 38 | 573 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002512459.1 | 0 | 27 | 555 | 43 | 577 | Pectinesterase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 242 | 553 | 7 | 315 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 243 | 553 | 4 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 2e-25 | 254 | 545 | 18 | 337 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 2e-25 | 254 | 545 | 18 | 337 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 2e-25 | 254 | 545 | 18 | 337 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |