y
Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 353497 |
Family | CE8 |
Protein Properties | Length: 610 Molecular Weight: 67967.4 Isoelectric Point: 9.6405 |
Chromosome | Chromosome/Scaffold: 7 Start: 3331810 End: 3333806 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 297 | 592 | 0 |
ATVAKDGSGNFTTINDALKAMPAKYQGRYTIYIKHGVYDESVIIDKKKPNVTMIGDGSQKTIVTGNKSHAKKIRTFVTATFVAQGEGFMAHSMGFRNTAG PEGHQAVAIRVQSDRSVFLNCRFEGYQDTLYAYTHRQYYRSCVIVGTVDFIFGDAAAIFQNCDIFIRKGLPGQKNTVTAQGRVDKFQTTGFVIHNCTIAP NEDLKPVKAEFKSYLGRPWKTHSRTVVMESTIEDVIDHVGWLRWQETDFAIDTLSYAEYKNDGPSGATVSRVKWPGFRVLNKEEAMKYTVGPFLQG |
Full Sequence |
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Protein Sequence Length: 610 Download |
MAFQDFDKIQ ERVNAERKRK FRKRIIFGIV SALVVVAAII GGAFAYVTYE NKTQEQGKTT 60 NNKSKDSPTK SESPSRKPPS SAAQTVKAGQ VDKIIQTLCN STLYKPTCEN TLKNGTKTDT 120 PLSDPRSLLT SAIVAVNDDL DRVFKKVLSL KTENKDDKDA IAQCKLLVDE AKEELGTSMK 180 RINDTEVNNF AKIVPDLDSW LSAVMSYQET CVDGFEEGKL KTEIRKNFNS SQVLTSNSLA 240 MIKSLDGYIS SVPKVKTRHL LEARSSAKET DHITSWLSNK ERRMLKAVDV NALKPNATVA 300 KDGSGNFTTI NDALKAMPAK YQGRYTIYIK HGVYDESVII DKKKPNVTMI GDGSQKTIVT 360 GNKSHAKKIR TFVTATFVAQ GEGFMAHSMG FRNTAGPEGH QAVAIRVQSD RSVFLNCRFE 420 GYQDTLYAYT HRQYYRSCVI VGTVDFIFGD AAAIFQNCDI FIRKGLPGQK NTVTAQGRVD 480 KFQTTGFVIH NCTIAPNEDL KPVKAEFKSY LGRPWKTHSR TVVMESTIED VIDHVGWLRW 540 QETDFAIDTL SYAEYKNDGP SGATVSRVKW PGFRVLNKEE AMKYTVGPFL QGEWIREMGS 600 PVKLGLYDA* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02990 | PLN02990 | 2.0e-143 | 93 | 595 | 510 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN02314 | PLN02314 | 3.0e-145 | 95 | 606 | 526 | + pectinesterase | ||
PLN02468 | PLN02468 | 4.0e-155 | 95 | 606 | 517 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02745 | PLN02745 | 0 | 1 | 607 | 611 | + Putative pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 296 | 593 | 299 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 293 | 606 | 5 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 296 | 608 | 4 | 317 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 5e-24 | 296 | 594 | 5 | 337 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 5e-24 | 296 | 594 | 5 | 337 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 5e-24 | 296 | 594 | 5 | 337 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |