y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.003G021600.1 |
Family | CE8 |
Protein Properties | Length: 561 Molecular Weight: 61375.1 Isoelectric Point: 9.6045 |
Chromosome | Chromosome/Scaffold: 03 Start: 2580276 End: 2582275 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 248 | 543 | 0 |
AVVAQDGSGQFKTISAAIAAYPNKLKGRYIIYVKAGTYREYVTIDKKKPNVFIYGDGPRKTIVTGSKSFAKDGLGTWKTATFVAEADGFIAKSIGFQNTA GPDGHQAVALRVSSDMSAFLNCRMDGYQDTLLYQAKRQFYRNCVISGTVDFIFGYGAAVIQNSLIVVRRPNANQQNSVTADGRKENHATTGLVIHNCRIV PEQKLVADRFKIPTYLGRPWKPFSRTVVMESELADFIQPAGWMPWAGSLHLDTLYYAEYANRGAGANTNKRVNWKTFHVINRNEALRFTAGQFLQG |
Full Sequence |
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Protein Sequence Length: 561 Download |
MLRKVVISAI SLFLIVGAVI GVAALVQPHQ KGSDGENEAG NISASMKIAN QLCQPSDYKE 60 ACTKTLSSVN STDPKEFVKH AILAASDAVT KSFNFSEELI VKASKDKREK MALDDCKELL 120 DYAVQELQAS MSMVGDSDLH TTNNRVAELQ SWLSAVLAYQ ETCVDGFDDK STIKPIIQQG 180 FVNASQLTDN VLAIISGLSD FLKSMGLQFN IPSNSRRLLG EDGFPTWFSG ADRKLLAAQD 240 KGKVKPNAVV AQDGSGQFKT ISAAIAAYPN KLKGRYIIYV KAGTYREYVT IDKKKPNVFI 300 YGDGPRKTIV TGSKSFAKDG LGTWKTATFV AEADGFIAKS IGFQNTAGPD GHQAVALRVS 360 SDMSAFLNCR MDGYQDTLLY QAKRQFYRNC VISGTVDFIF GYGAAVIQNS LIVVRRPNAN 420 QQNSVTADGR KENHATTGLV IHNCRIVPEQ KLVADRFKIP TYLGRPWKPF SRTVVMESEL 480 ADFIQPAGWM PWAGSLHLDT LYYAEYANRG AGANTNKRVN WKTFHVINRN EALRFTAGQF 540 LQGAAWIKNA GVPVLLGLKR * 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02197 | PLN02197 | 3.0e-156 | 36 | 558 | 566 | + pectinesterase | ||
PLN02468 | PLN02468 | 1.0e-161 | 3 | 558 | 563 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02217 | PLN02217 | 2.0e-164 | 33 | 558 | 530 | + probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 3.0e-178 | 247 | 543 | 298 | + Pectinesterase. | ||
PLN02745 | PLN02745 | 0 | 37 | 558 | 537 | + Putative pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002298185.1 | 0 | 41 | 560 | 38 | 558 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002298186.1 | 0 | 31 | 560 | 30 | 559 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002303172.1 | 0 | 29 | 560 | 29 | 560 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002304074.1 | 0 | 33 | 560 | 29 | 556 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002528620.1 | 0 | 35 | 560 | 31 | 557 | Pectinesterase-4 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 240 | 558 | 1 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 247 | 558 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 3e-20 | 247 | 517 | 5 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 3e-20 | 247 | 517 | 5 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 3e-20 | 247 | 517 | 5 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |