y
Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma02g01130.1 |
Family | CE8 |
Protein Properties | Length: 566 Molecular Weight: 61409.7 Isoelectric Point: 6.7875 |
Chromosome | Chromosome/Scaffold: 02 Start: 841661 End: 844027 |
Description | VANGUARD 1 homolog 2 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 253 | 546 | 0 |
ATVAKDGSGQFTTVLDAINSYPKKHQGRYIIYVKAGIYDEYITVDKKKPNLFIYGDGPTNTIITGRKNFHEGTKTMRTATFSTVAEDFMAKSIAFENTAG AEGHQAVALRVQGDRSVFFDCAMRGYQDTLYAHAHRQFYRNCEISGTIDFIFGYSTTLIQNSKILVRKPMANQQNIVVADGTGQKNMPTGIVLHNCEIMP DPTLLADRLSVKTYLARPWKAFSRAVFIENVIGDLIQPDGYIPWNPIEPNTQDCYFAEFGNTGPGSVAQARAKFGKGLISKQEAAQFTAEPWLQ |
Full Sequence |
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Protein Sequence Length: 566 Download |
MKGKVLGSAV SLILVVGVVI GVVAVVQSPK GVNNNNNGGE LKTSNRAVTA LCQGSDDQKL 60 CHEVLSSSNS TDPKEYIATV VRTSMDSVIK AFNMSDRLTV EHGNSSAGMK MALEDCKDLL 120 QSAIHDLEAS GVLVKESSLQ DVHQRTAELK NWLGAVVAYQ QSCLDGFDTD GEKKVQEQLQ 180 SGSLDNVGKL TGLALDVVSG ISHILQSLDL NLALKPASRR LLEVDQEGYP TWVSAADRKL 240 LAQLNDGAVL PHATVAKDGS GQFTTVLDAI NSYPKKHQGR YIIYVKAGIY DEYITVDKKK 300 PNLFIYGDGP TNTIITGRKN FHEGTKTMRT ATFSTVAEDF MAKSIAFENT AGAEGHQAVA 360 LRVQGDRSVF FDCAMRGYQD TLYAHAHRQF YRNCEISGTI DFIFGYSTTL IQNSKILVRK 420 PMANQQNIVV ADGTGQKNMP TGIVLHNCEI MPDPTLLADR LSVKTYLARP WKAFSRAVFI 480 ENVIGDLIQP DGYIPWNPIE PNTQDCYFAE FGNTGPGSVA QARAKFGKGL ISKQEAAQFT 540 AEPWLQASTW LPAAGVPFDA SFTKA* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02197 | PLN02197 | 3.0e-132 | 34 | 557 | 565 | + pectinesterase | ||
PLN02468 | PLN02468 | 9.0e-135 | 33 | 562 | 536 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02314 | PLN02314 | 2.0e-138 | 33 | 561 | 550 | + pectinesterase | ||
pfam01095 | Pectinesterase | 1.0e-151 | 252 | 548 | 300 | + Pectinesterase. | ||
PLN02745 | PLN02745 | 7.0e-166 | 45 | 557 | 528 | + Putative pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABO80924.1 | 0 | 35 | 557 | 29 | 569 | Pectinesterase; Pectinesterase inhibitor [Medicago truncatula] |
GenBank | ABO80928.1 | 0 | 35 | 562 | 29 | 574 | Pectinesterase; Pectinesterase inhibitor [Medicago truncatula] |
GenBank | ABO80933.1 | 0 | 40 | 547 | 34 | 562 | Pectinesterase; Pectinesterase inhibitor [Medicago truncatula] |
RefSeq | XP_002275000.1 | 0 | 41 | 562 | 44 | 567 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002303172.1 | 0 | 30 | 557 | 31 | 553 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 249 | 558 | 5 | 315 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 249 | 558 | 1 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 1e-22 | 248 | 552 | 1 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 1e-22 | 248 | 552 | 1 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 1e-22 | 248 | 552 | 1 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |