y
Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10015948m |
Family | CE8 |
Protein Properties | Length: 703 Molecular Weight: 76048 Isoelectric Point: 6.5893 |
Chromosome | Chromosome/Scaffold: 3 Start: 1658172 End: 1660366 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 255 | 550 | 0 |
DIVVAQDGSGQYTTINDALMFVPKKKNTTFVVHIKAGIYKEYVQVNKSMTHLVFIGDGPEKTIISGNKSYKDGITTYRTATVAIVGDYFIAKNIGFENTA GAIKHQAVALRVQSDEAIFFNCRFDGYQDTLYTHSHRQFFRDCTISGTIDFLFGDAAAVFQNCTLLVRKPLPNQACPITAHGRKDPRESTGFVFQGCTIA GEPDYLAVKETSKAYLGRPWKEYSRTIIMNTFIPDFVQPQGWQPWQGDFGLKTLFYSEVQNTGPGATVANRVTWAGIKTLSDEDILKFTPAQYIQG |
Full Sequence |
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Protein Sequence Length: 703 Download |
MSYGYDDDSK RKRRFVAITI SSVLLISMVV AVTIGVSLNK NDADSEDKGE ITASVKAVKD 60 VCAPTDYRKT CEDTLIQNGQ NTTDPMELVK TAFSATMKQI TDVAKKSQTM MELQKDPRTR 120 MALDQCTELM DYALGELSSS FEELGKFEFH KLDEALINLR IWLSAAISHE ETCLEGFQGT 180 QGNAGETMKK ALKTAIELTH NGLAIISEMS NFVGQMQIPG LNSRRLLAEG FPSWVDQRGR 240 RLLQAAAAYS DVKPDIVVAQ DGSGQYTTIN DALMFVPKKK NTTFVVHIKA GIYKEYVQVN 300 KSMTHLVFIG DGPEKTIISG NKSYKDGITT YRTATVAIVG DYFIAKNIGF ENTAGAIKHQ 360 AVALRVQSDE AIFFNCRFDG YQDTLYTHSH RQFFRDCTIS GTIDFLFGDA AAVFQNCTLL 420 VRKPLPNQAC PITAHGRKDP RESTGFVFQG CTIAGEPDYL AVKETSKAYL GRPWKEYSRT 480 IIMNTFIPDF VQPQGWQPWQ GDFGLKTLFY SEVQNTGPGA TVANRVTWAG IKTLSDEDIL 540 KFTPAQYIQG DTWVPGKGVP YTSGLLAGNP AAATTVPSGS PAPGFSSFAD TSGAGSISPT 600 DSPAASPKSS MKMVSTERSP AASPATSSES SVKMVSTERH ATSSISPTGS LATSPESSIR 660 MASTEHPGAG YITPTTSPAA SPESSFMMAS IESAISMVSK ST* 720 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02468 | PLN02468 | 3.0e-162 | 10 | 565 | 568 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02217 | PLN02217 | 0 | 1 | 665 | 671 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02990 | PLN02990 | 0 | 4 | 565 | 574 | + Probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 255 | 551 | 298 | + Pectinesterase. | ||
PLN02745 | PLN02745 | 0 | 10 | 565 | 587 | + Putative pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAC42986.1 | 0 | 1 | 671 | 1 | 665 | putative pectinesterase [Arabidopsis thaliana] |
RefSeq | NP_187212.1 | 0 | 1 | 671 | 1 | 665 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | NP_198139.1 | 0 | 1 | 698 | 1 | 681 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002314364.1 | 0 | 44 | 567 | 46 | 570 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002512459.1 | 0 | 1 | 565 | 1 | 579 | Pectinesterase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 250 | 565 | 3 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 257 | 565 | 6 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 4e-21 | 265 | 543 | 43 | 353 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 9e-21 | 266 | 555 | 18 | 339 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 9e-21 | 266 | 555 | 18 | 339 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |