y
Basic Information | |
---|---|
Species | Medicago truncatula |
Cazyme ID | Medtr1g086190.1 |
Family | CE8 |
Protein Properties | Length: 567 Molecular Weight: 61463.7 Isoelectric Point: 6.3281 |
Chromosome | Chromosome/Scaffold: 1 Start: 22934587 End: 22936597 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE8 | 255 | 548 | 0 |
AVVAKDGSGKFKTVLDAINSYPKNHQGRYVIYVKAGVYDEYIQIDKTKKNILIYGDGPTKTIITGKKNFVDGVKTIQTATFSTVAEGFIAKAMAFENTAG ANKHQAVALRVQGDKSAFFDCAIRGYQDTLYAHAHRQFYRNCEISGTVDFIFGYASTVIQNSKIVVRKPEANQQNIIVADGTVQKNMPTGVVLQNCEIMP EPALQPDRLKVRSFLARPWKAYSRAIFMENTIGDLIQPDGFLPWAGTQFLDTCFFAEYANTGPGSNVQARVKWGKGVLSKADATKYTAAQWIEG |
Full Sequence |
---|
Protein Sequence Length: 567 Download |
MERKIFVSGV SLILVVGVAL GVVALVRTNN GPADANNGGE LTSHTKAVTA VCQNSDDHKF 60 CADTLGSVNT SDPNDYIKAV VKTSIESVIK AFNMTDKLAV ENEKNNQSTK MALDDCKDLL 120 EFAIDELQAS SILAADNSSV HNVNDRAADL KNWLGAVFAY QQSCLDGFDT DGEKQVQSQL 180 QTGSLDHVGK LTALALDVVT AITKVLAALD LDLNVKPSSR RLFEVDEDGN PEWMSGADRK 240 LLADMSTGMS VTPNAVVAKD GSGKFKTVLD AINSYPKNHQ GRYVIYVKAG VYDEYIQIDK 300 TKKNILIYGD GPTKTIITGK KNFVDGVKTI QTATFSTVAE GFIAKAMAFE NTAGANKHQA 360 VALRVQGDKS AFFDCAIRGY QDTLYAHAHR QFYRNCEISG TVDFIFGYAS TVIQNSKIVV 420 RKPEANQQNI IVADGTVQKN MPTGVVLQNC EIMPEPALQP DRLKVRSFLA RPWKAYSRAI 480 FMENTIGDLI QPDGFLPWAG TQFLDTCFFA EYANTGPGSN VQARVKWGKG VLSKADATKY 540 TAAQWIEGGV WLPATGIPFD LGFTKG* 600 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02314 | PLN02314 | 8.0e-140 | 27 | 561 | 546 | + pectinesterase | ||
PLN02217 | PLN02217 | 5.0e-140 | 33 | 566 | 548 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02468 | PLN02468 | 9.0e-150 | 27 | 563 | 545 | + putative pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 2.0e-161 | 254 | 548 | 297 | + Pectinesterase. | ||
PLN02745 | PLN02745 | 2.0e-173 | 46 | 562 | 526 | + Putative pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABO80924.1 | 0 | 40 | 563 | 34 | 574 | Pectinesterase; Pectinesterase inhibitor [Medicago truncatula] |
GenBank | ABO80928.1 | 0 | 40 | 563 | 34 | 574 | Pectinesterase; Pectinesterase inhibitor [Medicago truncatula] |
EMBL | CBI26012.1 | 0 | 27 | 563 | 30 | 567 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002275000.1 | 0 | 27 | 563 | 30 | 567 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002303172.1 | 0 | 31 | 565 | 32 | 560 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 250 | 563 | 4 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 251 | 559 | 1 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 5e-23 | 250 | 553 | 1 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 5e-23 | 250 | 553 | 1 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 5e-23 | 250 | 553 | 1 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |