y
Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra037013 |
Family | CE8 |
Protein Properties | Length: 609 Molecular Weight: 67533.2 Isoelectric Point: 10.1754 |
Chromosome | Chromosome/Scaffold: 03 Start: 28968134 End: 28970623 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 295 | 590 | 0 |
AIVAKDGSGNFTTINAALKAMPAKYKGRYTIYIKHGVYDESVIVDKNKANVTMVGDGSQKTIVTGNKSHAKKVRTFLTATFVAQGEGFMAHSMGFRNTAG PDKHQAVAIRVQSDRSVFQNCRFEGYQDTLYAYTHRQFYRSCVIVGTIDFIFGDAAALFQNCNIFIRKGVQGQKNTVTSQGRVDKFQTTGFVIQNCTIAP NEDLKPVKAQFKSYLGRPCKNHSRTVVMESTIEDVIDPVGWLRWQETDFAIGTLLYAEYKNDGPSGKTTSRVKWPGFRAINKEEAMKYTVGPFLQG |
Full Sequence |
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Protein Sequence Length: 609 Download |
MAFQDFDLIQ ERVNADRQRK FRKKIIIGVV STLVVVAVIT GGAFAYVTYG KNSQEPVKTT 60 NTNSKSKSSD KSSEKSTATP SNKPPSSAAA HSDKPGQVDK IIKALCNSTL YKPSCEKTLK 120 NGTKTASPLS DPRSLLKSSI KATNDDLVKG FEKVLKLKTG NKDEKDAIAQ CKLLVDEAKE 180 ELNTSMKRIN DTKVNSFAKI TPDLDTWLSA VMSHQETCLD GFEEGKLKTE IRKNFNSSQM 240 MTSNSLAMIK SLDTYLSKAK KVKTRHLLES RSSWLGNKER RMLKAVDVKA LKPNAIVAKD 300 GSGNFTTINA ALKAMPAKYK GRYTIYIKHG VYDESVIVDK NKANVTMVGD GSQKTIVTGN 360 KSHAKKVRTF LTATFVAQGE GFMAHSMGFR NTAGPDKHQA VAIRVQSDRS VFQNCRFEGY 420 QDTLYAYTHR QFYRSCVIVG TIDFIFGDAA ALFQNCNIFI RKGVQGQKNT VTSQGRVDKF 480 QTTGFVIQNC TIAPNEDLKP VKAQFKSYLG RPCKNHSRTV VMESTIEDVI DPVGWLRWQE 540 TDFAIGTLLY AEYKNDGPSG KTTSRVKWPG FRAINKEEAM KYTVGPFLQG DPWIHDMGSQ 600 VKFGLYDA* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02301 | PLN02301 | 2.0e-141 | 99 | 605 | 511 | + pectinesterase/pectinesterase inhibitor | ||
PLN02314 | PLN02314 | 2.0e-152 | 80 | 598 | 540 | + pectinesterase | ||
PLN02468 | PLN02468 | 2.0e-159 | 102 | 605 | 515 | + putative pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 2.0e-178 | 294 | 591 | 299 | + Pectinesterase. | ||
PLN02745 | PLN02745 | 0 | 1 | 606 | 620 | + Putative pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC14494.1 | 0 | 115 | 608 | 4 | 496 | putative pectinesterase [Arabidopsis thaliana] |
RefSeq | NP_195049.1 | 0 | 1 | 608 | 1 | 609 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | NP_850077.1 | 0 | 1 | 608 | 1 | 614 | pectinesterase family protein [Arabidopsis thaliana] |
Swiss-Prot | Q7Y201 | 0 | 1 | 608 | 1 | 614 | PME13_ARATH RecName: Full=Probable pectinesterase/pectinesterase inhibitor 13; Includes: RecName: Full=Pectinesterase inhibitor 13; AltName: Full=Pectin methylesterase inhibitor 13; Includes: RecName: Full=Pectinesterase 13; Short=PE 13; AltName: Full=Pectin methylesterase 13; Short=AtPME13 |
RefSeq | XP_002273499.1 | 0 | 99 | 606 | 79 | 597 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 294 | 607 | 4 | 317 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 291 | 605 | 5 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 3uw0_A | 7e-21 | 268 | 461 | 8 | 220 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 1e-20 | 294 | 583 | 5 | 329 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 1e-20 | 294 | 583 | 5 | 329 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |