y
Basic Information | |
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Species | Arabidopsis thaliana |
Cazyme ID | AT3G06830.1 |
Family | CE8 |
Protein Properties | Length: 569 Molecular Weight: 61886.2 Isoelectric Point: 8.9261 |
Chromosome | Chromosome/Scaffold: 3 Start: 2153864 End: 2156148 |
Description | pectinesterase, putative, expressed |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 258 | 552 | 0 |
AVVAQDGTGQFKTITDALNAVPKGNKVPFIIHIKEGIYKEKVTVTKKMPHVTFIGDGPNKTLITGSLNFGIGKVKTFLTATITIEGDHFTAKNIGIENTA GPEGGQAVALRVSADYAVFHSCQIDGHQDTLYVHSHRQFYRDCTVSGTVDFIFGDAKCILQNCKIVVRKPNKGQTCMVTAQGRSNVRESTGLVLHGCHIT GDPAYIPMKSVNKAYLGRPWKEFSRTIIMKTTIDDVIDPAGWLPWSGDFALKTLYYAEHMNTGPGSNQAQRVKWPGIKKLTPQDALLYTGDRFLR |
Full Sequence |
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Protein Sequence Length: 569 Download |
MGSDGDKKKK FIVAGSVSGF LVIMVVSVAV VTSKHSPKDD ENHIRKTTKA VQAVCAPTDF 60 KDTCVNSLMG ASPDSDDPVD LIKLGFKVTI KSINESLEKA SGDIKAKADK NPEAKGAFEL 120 CEKLMIDAID DLKKCMDHGF SVDQIEVFVE DLRVWLSGSI AFQQTCMDSF GEIKSNLMQD 180 MLKIFKTSRE LSSNSLAMVT RISTLIPNSN LTGLTGALAK YARKLLSTED SIPTWVGPEA 240 RRLMAAQGGG PGPVKANAVV AQDGTGQFKT ITDALNAVPK GNKVPFIIHI KEGIYKEKVT 300 VTKKMPHVTF IGDGPNKTLI TGSLNFGIGK VKTFLTATIT IEGDHFTAKN IGIENTAGPE 360 GGQAVALRVS ADYAVFHSCQ IDGHQDTLYV HSHRQFYRDC TVSGTVDFIF GDAKCILQNC 420 KIVVRKPNKG QTCMVTAQGR SNVRESTGLV LHGCHITGDP AYIPMKSVNK AYLGRPWKEF 480 SRTIIMKTTI DDVIDPAGWL PWSGDFALKT LYYAEHMNTG PGSNQAQRVK WPGIKKLTPQ 540 DALLYTGDRF LRGDTWIPQT QVPYTAKV* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02468 | PLN02468 | 8.0e-157 | 12 | 564 | 554 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02990 | PLN02990 | 0 | 1 | 568 | 575 | + Probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 257 | 554 | 299 | + Pectinesterase. | ||
PLN02745 | PLN02745 | 0 | 32 | 563 | 539 | + Putative pectinesterase/pectinesterase inhibitor | ||
PLN02217 | PLN02217 | 0 | 4 | 565 | 565 | + probable pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0009505 | plant-type cell wall |
GO:0012505 | endomembrane system |
GO:0030599 | pectinesterase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAF63815.1 | 0 | 1 | 568 | 1 | 562 | pectin methylesterase, putative [Arabidopsis thaliana] |
DDBJ | BAC42959.2 | 0 | 1 | 567 | 1 | 567 | putative pectin methylesterase [Arabidopsis thaliana] |
RefSeq | NP_187339.2 | 0 | 1 | 568 | 1 | 568 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | NP_199729.1 | 0 | 33 | 564 | 37 | 566 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002314364.1 | 0 | 34 | 566 | 46 | 566 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 256 | 564 | 3 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 254 | 565 | 5 | 316 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_B | 2e-31 | 257 | 558 | 5 | 339 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_A | 2e-31 | 257 | 558 | 5 | 339 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntp_B | 2e-31 | 257 | 558 | 5 | 339 | A Chain A, Pectin Methylesterase From Carrot |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |