y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.006G260800.1 |
Family | CE8 |
Protein Properties | Length: 562 Molecular Weight: 61038.7 Isoelectric Point: 6.7671 |
Chromosome | Chromosome/Scaffold: 06 Start: 50153536 End: 50155586 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 245 | 541 | 0 |
NVVVAKDGSGKYDTINKALAEVPVKSPDRFVIHIKAGTYKEQINVTKQMTNVVFVGDGPTKTIITNDISVAKNPPVKTYRTATVAADGAGFMAKDIGFDN SAGPEGHQAVAFRATADRVIMFNCHFTGYQDTLYAHRERQLYSNCLITGTVDFIFGDAASIFQNCMLVVRKPGPGQNCMVTAQGRNDLGTNSAIVLQNCT ISGAPDYIPVKDTNKAYLGRPWKQFARSIIMQSRIDDIIQPEGYAPMTGTIGIDTSFIAEFGNRGPGADTSRRVAWKGIKKIDINEANKWTPRVFLE |
Full Sequence |
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Protein Sequence Length: 562 Download |
MANNAIIGIC AVFLVALVVA VVVGVTHIKN KSDGEEISSS NKAVQALCQP TNYKETCQKS 60 LASSNSSDVK ELIRTGFQAG LVEIKNVLAH SVTVQELIKD ENNKAALGVC QEVLDLAIDD 120 FQKSFDMLGE YDMSKIGKYL LELKTWLSGA FTSQQTCIDS FAESSNESSQ KMQSILKTSM 180 EITSNALAML NGLSTIVKEL NIPNVGNIDT TGVNRKLLSA EDMPEWISQA DRKLLQAKPM 240 DLKPNVVVAK DGSGKYDTIN KALAEVPVKS PDRFVIHIKA GTYKEQINVT KQMTNVVFVG 300 DGPTKTIITN DISVAKNPPV KTYRTATVAA DGAGFMAKDI GFDNSAGPEG HQAVAFRATA 360 DRVIMFNCHF TGYQDTLYAH RERQLYSNCL ITGTVDFIFG DAASIFQNCM LVVRKPGPGQ 420 NCMVTAQGRN DLGTNSAIVL QNCTISGAPD YIPVKDTNKA YLGRPWKQFA RSIIMQSRID 480 DIIQPEGYAP MTGTIGIDTS FIAEFGNRGP GADTSRRVAW KGIKKIDINE ANKWTPRVFL 540 ESETWIPSSG IPYSPDMVPG V* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02468 | PLN02468 | 2.0e-156 | 29 | 557 | 536 | + putative pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 1.0e-163 | 245 | 540 | 297 | + Pectinesterase. | ||
PLN02745 | PLN02745 | 1.0e-170 | 37 | 552 | 531 | + Putative pectinesterase/pectinesterase inhibitor | ||
PLN02990 | PLN02990 | 0 | 26 | 553 | 533 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN02217 | PLN02217 | 0 | 30 | 560 | 536 | + probable pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI22967.1 | 0 | 37 | 558 | 40 | 543 | unnamed protein product [Vitis vinifera] |
EMBL | CBI39537.1 | 0 | 35 | 554 | 50 | 571 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002279123.1 | 0 | 35 | 554 | 50 | 571 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002314364.1 | 0 | 36 | 558 | 52 | 569 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002516960.1 | 0 | 36 | 558 | 60 | 577 | Pectinesterase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 242 | 554 | 5 | 316 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 245 | 553 | 4 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 1e-17 | 245 | 466 | 5 | 245 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 1e-17 | 245 | 466 | 5 | 245 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 1e-17 | 245 | 466 | 5 | 245 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |