y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.005G257300.1 |
Family | CE8 |
Protein Properties | Length: 561 Molecular Weight: 62955.2 Isoelectric Point: 9.5174 |
Chromosome | Chromosome/Scaffold: 05 Start: 63360398 End: 63362308 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 242 | 540 | 0 |
NVVVAKDGSGQFKTIAAALAAAPKNSNVRYVIYIKAGIYKEYITVGKQYTNILMYGDGPRKTIVTGSKGVKSGGGITTWQTATFSAIGNGFIAKSMRFQN TAGPKKHQAVALRVQSDKSAFFNCRMDAYQDTLYNQANRQFFRNCIISGTIDFIFGDSPTFIQNSLLIVRRPMDNQFNTITAQGKDFIDENTGTVIQNCR IVPEQKLFNDRFKFATYLGRPWKKFSTTVIMESILGDLIKPEGWMQFEGLDKVNFEETLYYAEYNNRGPGANLNARVNWKGYHKIDRAAAMNFTIQSFL |
Full Sequence |
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Protein Sequence Length: 561 Download |
MSKQVIIAGV SLIIVVGVII GITITFQQTS NDEEKLSPTM KKVSIFCSST YYQKSCQKTL 60 MSVNSTDPKE FIAKAILDAE EAVKKFINYS DSLIVQVKNN SLTKMALDDC KDMMNYAIDS 120 LQASYSNVTS NELRNINDRI NDLRTWLSAV ISYQQSCLDG FEHDDDMKGT LQKGIVDASE 180 LTCNALTIVT KLVYILPKFG IQFNITNTRK LLFAEKNGYP PWFSAKDRHL LAKIDNNNLK 240 PNVVVAKDGS GQFKTIAAAL AAAPKNSNVR YVIYIKAGIY KEYITVGKQY TNILMYGDGP 300 RKTIVTGSKG VKSGGGITTW QTATFSAIGN GFIAKSMRFQ NTAGPKKHQA VALRVQSDKS 360 AFFNCRMDAY QDTLYNQANR QFFRNCIISG TIDFIFGDSP TFIQNSLLIV RRPMDNQFNT 420 ITAQGKDFID ENTGTVIQNC RIVPEQKLFN DRFKFATYLG RPWKKFSTTV IMESILGDLI 480 KPEGWMQFEG LDKVNFEETL YYAEYNNRGP GANLNARVNW KGYHKIDRAA AMNFTIQSFL 540 LSKEDWLPST GIPFTTTLRY * 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02197 | PLN02197 | 3.0e-137 | 31 | 558 | 569 | + pectinesterase | ||
PLN02468 | PLN02468 | 1.0e-142 | 27 | 558 | 536 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02314 | PLN02314 | 5.0e-146 | 47 | 558 | 529 | + pectinesterase | ||
pfam01095 | Pectinesterase | 2.0e-152 | 242 | 540 | 301 | + Pectinesterase. | ||
PLN02745 | PLN02745 | 2.0e-175 | 27 | 553 | 540 | + Putative pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI26012.1 | 0 | 31 | 559 | 39 | 568 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002274176.1 | 0 | 36 | 559 | 40 | 564 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002275000.1 | 0 | 31 | 559 | 39 | 568 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002298186.1 | 0 | 33 | 559 | 38 | 558 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002303172.1 | 0 | 31 | 559 | 37 | 559 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 235 | 558 | 1 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 242 | 558 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 2e-25 | 242 | 549 | 5 | 340 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 2e-25 | 242 | 549 | 5 | 340 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 2e-25 | 242 | 549 | 5 | 340 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |