y
Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr5g083620.1 |
Family | CE8 |
Protein Properties | Length: 388 Molecular Weight: 42949.4 Isoelectric Point: 7.0014 |
Chromosome | Chromosome/Scaffold: 5 Start: 35067044 End: 35068663 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 73 | 367 | 0 |
AIVAMDGSGQYKTITDGINSYPNNHQGRYIIHVKAGIYKEYVTVDQSKKNILLYGDGPNRTIITGNKSFTEGIQMPLTATFSTFAENFTAISIVFENTAG PKGGQAVALRVKGDLSSFYQCTFRGYQDTLYVDQGRQFYRNCVISGTIDFICGHSTTLIQNSMILVRKPASGQYNVVVADGPYQNNNLRTGIVIDHCSIL PDYDFAPYTSTSKTYLARPWRPYSTAIFINNFIGNFIQPDGYTIWREVQPNNENVYFAEFGNTGPGANAKNRVYWAKGLITRDEAARFTAEPWIQ |
Full Sequence |
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Protein Sequence Length: 388 Download |
MESLNTPWCL YVSARCILIS IFALSVLMAS TDADMSMYRS LVEVDHDGNP SWLSAGDRTL 60 VSQIKNGIAQ PNAIVAMDGS GQYKTITDGI NSYPNNHQGR YIIHVKAGIY KEYVTVDQSK 120 KNILLYGDGP NRTIITGNKS FTEGIQMPLT ATFSTFAENF TAISIVFENT AGPKGGQAVA 180 LRVKGDLSSF YQCTFRGYQD TLYVDQGRQF YRNCVISGTI DFICGHSTTL IQNSMILVRK 240 PASGQYNVVV ADGPYQNNNL RTGIVIDHCS ILPDYDFAPY TSTSKTYLAR PWRPYSTAIF 300 INNFIGNFIQ PDGYTIWREV QPNNENVYFA EFGNTGPGAN AKNRVYWAKG LITRDEAARF 360 TAEPWIQAST WLPSAGIPYN PGFETLS* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02197 | PLN02197 | 7.0e-100 | 32 | 383 | 363 | + pectinesterase | ||
PLN02468 | PLN02468 | 6.0e-101 | 35 | 383 | 357 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02314 | PLN02314 | 6.0e-104 | 26 | 379 | 363 | + pectinesterase | ||
PLN02745 | PLN02745 | 1.0e-111 | 45 | 382 | 339 | + Putative pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 2.0e-121 | 72 | 369 | 303 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABO80928.1 | 0 | 33 | 384 | 215 | 575 | Pectinesterase; Pectinesterase inhibitor [Medicago truncatula] |
EMBL | CBI26012.1 | 0 | 36 | 386 | 218 | 570 | unnamed protein product [Vitis vinifera] |
EMBL | CBI37069.1 | 0 | 39 | 384 | 52 | 400 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002274176.1 | 0 | 24 | 384 | 201 | 564 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002275000.1 | 0 | 36 | 386 | 218 | 570 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 71 | 383 | 7 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 72 | 383 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 2e-24 | 72 | 374 | 5 | 340 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 2e-24 | 72 | 374 | 5 | 340 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 2e-24 | 72 | 374 | 5 | 340 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |