y
Basic Information | |
---|---|
Species | Brachypodium distachyon |
Cazyme ID | Bradi1g16780.1 |
Family | CE8 |
Protein Properties | Length: 576 Molecular Weight: 62474.6 Isoelectric Point: 5.6028 |
Chromosome | Chromosome/Scaffold: 1 Start: 13524749 End: 13526560 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE8 | 254 | 550 | 0 |
NVTVAADGSGDFKTINEALAKVPPKSTAMYVMYVKAGTYKEYVSVGRPITNLVMIGDGAEKTIITGNKNFKMNLTTKDTATMEAIGNGFFMRDIRVENTA GAANHQAVALRVQSDQAVFFQCTFDGYQDTLYTHAQRQFFRDCRITGTIDFIFGNSQVVIQNCLIQPRKPMDNQVNIITAQGRREKRSVGGTVMHNNTIE PHPDFVSSTGKIATYLARPWKEYSRTIYIQNNIGAFIDPKGWLEWNGNFGLETLFYAEVDNHGPGADMSKRAKWGGIKTVTYEDAQKEFTVETFIQG |
Full Sequence |
---|
Protein Sequence Length: 576 Download |
MSKPAIIGAS TVLVVAVVAA VCVVSSKNNN GGGGGGEEGG QLSTSVKSVK AFCQPMDYKE 60 TCEAELSKMS GDKPTSPTEL AKAIFEATSA KINKAVAESA TLEELKNDKR TSGALQNCKE 120 LLEYAVEDLK TSFDKLGGFE MTDFNKAVDD LKTWLSAALT YQETCLDGFL NTTGDASAKM 180 KGALNASQEL TEDILAVVDQ FSATLGSLSF GKRRLLADDG APTWMTDGKR RLMEASAGAP 240 SSSSSSSPMD FEPNVTVAAD GSGDFKTINE ALAKVPPKST AMYVMYVKAG TYKEYVSVGR 300 PITNLVMIGD GAEKTIITGN KNFKMNLTTK DTATMEAIGN GFFMRDIRVE NTAGAANHQA 360 VALRVQSDQA VFFQCTFDGY QDTLYTHAQR QFFRDCRITG TIDFIFGNSQ VVIQNCLIQP 420 RKPMDNQVNI ITAQGRREKR SVGGTVMHNN TIEPHPDFVS STGKIATYLA RPWKEYSRTI 480 YIQNNIGAFI DPKGWLEWNG NFGLETLFYA EVDNHGPGAD MSKRAKWGGI KTVTYEDAQK 540 EFTVETFIQG QQFIPKFGVP YIPGLLPQSE DGRAH* 600 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02468 | PLN02468 | 2.0e-155 | 48 | 565 | 521 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02314 | PLN02314 | 4.0e-158 | 44 | 561 | 533 | + pectinesterase | ||
pfam01095 | Pectinesterase | 7.0e-165 | 254 | 550 | 298 | + Pectinesterase. | ||
PLN02745 | PLN02745 | 9.0e-172 | 47 | 565 | 533 | + Putative pectinesterase/pectinesterase inhibitor | ||
PLN02217 | PLN02217 | 3.0e-178 | 41 | 566 | 529 | + probable pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAZ05229.1 | 0 | 42 | 575 | 38 | 570 | hypothetical protein OsI_27427 [Oryza sativa Indica Group] |
GenBank | EAZ41174.1 | 0 | 42 | 575 | 38 | 570 | hypothetical protein OsJ_25671 [Oryza sativa Japonica Group] |
RefSeq | NP_001060715.1 | 0 | 42 | 575 | 38 | 566 | Os07g0691100 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001151322.1 | 0 | 27 | 573 | 27 | 565 | pectinesterase-1 [Zea mays] |
RefSeq | XP_002461260.1 | 0 | 27 | 575 | 27 | 571 | hypothetical protein SORBIDRAFT_02g043780 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 253 | 565 | 7 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 254 | 565 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 4e-17 | 265 | 539 | 18 | 300 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 4e-17 | 265 | 539 | 18 | 300 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 4e-17 | 265 | 539 | 18 | 300 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |