| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.009G039000.1 |
| Family | CE8 |
| Protein Properties | Length: 668 Molecular Weight: 73444.8 Isoelectric Point: 9.7814 |
| Chromosome | Chromosome/Scaffold: 09 Start: 2862086 End: 2864425 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 356 | 651 | 0 |
| NVTVAQDGSGNFRTINEALAAVPQKYGGRYVIYVKAGIYDETVIVPKKMVNLTIFGDGSQKSIITGAKNFVDGFPTYQTASFVASGPGFIAKSMGFRNTA GPDKHQAVAARVDGDRAIFLNCRFEGFQDTLYTQTHRQFYRSCVIAGTIDFIFGDATVVFQNCLIYVRKPNDNQKNIVTAQGRKDKLETTGIVIQNSKIL PEEPFKPLAKQFKNYLGRPWKVYSRTIIMETLIEDFIDPAGWLEWEGDFALSTLFYGEFNNTGPGARTDGRVKWAGRRDINREEAQKYTVETFLKG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 668 Download |
| MVFQDFDIIQ ERRRQERQRK LKKRLIIALV AIFVIAGIAA AGALAFISMK NSSKKSEKNK 60 SDDNSKADDS KPKDNPPPST PSTPPSTPST PPSPPKPSSP PSPKPPAPKP LAAAAPAPKA 120 SFPPAPVPAP LPAPKSAPAP SPSFGEGASE FIKSFCEIST FKDYCANTIG KTLEENPQSA 180 TQPKELVKSF ITKTTDELDK AFTKASTFEL KTDVERKAFD VCKEVMANAK EELQSSVDRV 240 GTIEPGKLPS NGDLNTWLSA VMSYQETCID SFPDGPLKND FRTTLNSSQV YTSNSLAMVR 300 QLSSLMTLGK EKPPAKRRLL QTKFPLLAKG GYPSWFNHEE RRLLKEADDD KKPIPNVTVA 360 QDGSGNFRTI NEALAAVPQK YGGRYVIYVK AGIYDETVIV PKKMVNLTIF GDGSQKSIIT 420 GAKNFVDGFP TYQTASFVAS GPGFIAKSMG FRNTAGPDKH QAVAARVDGD RAIFLNCRFE 480 GFQDTLYTQT HRQFYRSCVI AGTIDFIFGD ATVVFQNCLI YVRKPNDNQK NIVTAQGRKD 540 KLETTGIVIQ NSKILPEEPF KPLAKQFKNY LGRPWKVYSR TIIMETLIED FIDPAGWLEW 600 EGDFALSTLF YGEFNNTGPG ARTDGRVKWA GRRDINREEA QKYTVETFLK GTWVKEAGAP 660 VRMGLGS* 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02301 | PLN02301 | 3.0e-152 | 185 | 665 | 485 | + pectinesterase/pectinesterase inhibitor | ||
| PLN02314 | PLN02314 | 2.0e-159 | 148 | 660 | 529 | + pectinesterase | ||
| PLN02468 | PLN02468 | 5.0e-160 | 145 | 665 | 526 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN02745 | PLN02745 | 0 | 152 | 665 | 517 | + Putative pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 0 | 356 | 651 | 297 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAA89480.1 | 0 | 125 | 665 | 61 | 596 | pectin methylesterase [Salix gilgiana] |
| RefSeq | XP_002326319.1 | 0 | 132 | 665 | 62 | 597 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002516193.1 | 0 | 152 | 665 | 80 | 592 | Pectinesterase-1 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 355 | 665 | 7 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 354 | 665 | 2 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 1e-21 | 367 | 654 | 18 | 338 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 1e-21 | 367 | 654 | 18 | 338 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 1e-21 | 367 | 654 | 18 | 338 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
