y
Basic Information | |
---|---|
Species | Brachypodium distachyon |
Cazyme ID | Bradi5g23550.1 |
Family | CE8 |
Protein Properties | Length: 787 Molecular Weight: 85906.3 Isoelectric Point: 6.7217 |
Chromosome | Chromosome/Scaffold: 5 Start: 25458422 End: 25460889 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE8 | 475 | 769 | 0 |
AVVAADGSGNFKTITEAVNAAPKKSTARFVIYVKAGEYKEYVTIPKDVTNVFMFGDGPTKTRVVGDKSNKGGFATIATRTFSAEGNGFICKSMGFVNTAG PDGHQAVALHVQGDMSVFFNCRFEGYQDTLYVHANRQFFRNCEVLGTIDFIFGNSAALFQNCLMTVRKPMESQANMVTAHGRTDPNMPTGIVLQGCKIVP EQELFPARLTIASYLGRPWKEYSRTVVMESTIGDLIRPEGWSEWMGDLGLKTLYYAEYNNNGPGAGTSKRVAWPGYRVIGQAEATHFTAGVFIDG |
Full Sequence |
---|
Protein Sequence Length: 787 Download |
MANKAATASI IAAVGVVAVI GTIAAVTASK KAHDGSDGGS AMSTSIKLSA LCSSTLYPTK 60 CEKSLSPVVN ETSDPEEVLK ASLQVAMDEV AAAFARYAYV GKGATDGTVT KSAIGECKKL 120 LDDAVGDLKD MAGLRADQVV SHVKDLRTWL SGVMTYIYTC ADGFDKPELK EAMDKLLQNS 180 TELSSNALAI VTRVGEFLKG QESAQKNGTS IGAGSRRLLG WPAIISDAET RRRRLLEISG 240 KLDEIASVRD ASRRLLVETM DEIDQMSHDG SRRLDNFVFG DHFSNLTDIP SQSKESDFVR 300 RRLLSMSFDD ASSKATDDSD RDAVRRRRRL LSAQLESIAD MSAQLNRRLL AMDVPTGDDM 360 AGKKRQRLSN SLVMINDAAA EAQAQLEEID DNCGNDFTPP EEEERRALTS DVIGTIEDLD 420 HKHHQRKMLT TDVVGTIDDL DHKHHHRRKL LTFPEWVPAQ ARRLLQIPGL QKPNAVVAAD 480 GSGNFKTITE AVNAAPKKST ARFVIYVKAG EYKEYVTIPK DVTNVFMFGD GPTKTRVVGD 540 KSNKGGFATI ATRTFSAEGN GFICKSMGFV NTAGPDGHQA VALHVQGDMS VFFNCRFEGY 600 QDTLYVHANR QFFRNCEVLG TIDFIFGNSA ALFQNCLMTV RKPMESQANM VTAHGRTDPN 660 MPTGIVLQGC KIVPEQELFP ARLTIASYLG RPWKEYSRTV VMESTIGDLI RPEGWSEWMG 720 DLGLKTLYYA EYNNNGPGAG TSKRVAWPGY RVIGQAEATH FTAGVFIDGI SWLQSTGTPN 780 VMGFIK* 840 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02301 | PLN02301 | 1.0e-5 | 48 | 241 | 205 | + pectinesterase/pectinesterase inhibitor | ||
PLN02745 | PLN02745 | 9.0e-24 | 51 | 219 | 175 | + Putative pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 7.0e-136 | 453 | 777 | 327 | + pectinesterase/pectinesterase inhibitor | ||
PLN02745 | PLN02745 | 7.0e-155 | 454 | 783 | 332 | + Putative pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 474 | 769 | 297 | + Pectinesterase. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAC09455.2 | 0 | 289 | 786 | 243 | 717 | H0423H10.1 [Oryza sativa (indica cultivar-group)] |
GenBank | EAY95754.1 | 0 | 289 | 786 | 497 | 971 | hypothetical protein OsI_17629 [Oryza sativa Indica Group] |
RefSeq | NP_001145377.1 | 0 | 34 | 786 | 30 | 727 | hypothetical protein LOC100278720 [Zea mays] |
RefSeq | XP_002447200.1 | 0 | 30 | 786 | 30 | 739 | hypothetical protein SORBIDRAFT_06g030310 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 474 | 784 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 473 | 784 | 7 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1qjv_B | 1e-26 | 474 | 762 | 5 | 329 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 1e-26 | 474 | 762 | 5 | 329 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 2e-26 | 474 | 762 | 5 | 329 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |