y
Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10020909 |
Family | CE8 |
Protein Properties | Length: 562 Molecular Weight: 61357.6 Isoelectric Point: 6.367 |
Chromosome | Chromosome/Scaffold: 711 Start: 553081 End: 555522 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 249 | 541 | 0 |
DIVVAKDGSGQFKSIMEAIKTIQKKHKVPIVMHVKAGVYNEQVLIPKYVTGLMMIGDGPTKTKVTGRKNFHEGTRTSDTATFAILAPGFIAKDMGFENTA GAEGHQAVAYRSQSDNSVIYNCQFDGYQDTLYPQSNRQFYRDCVISGTIDFIFGVARAVLQNCTMIIRKPMANQACIVTAEGRKDPNGLSAIVIQNSRIK GDPAYVPVKDQNKGYLARPWKIYSRTVIMHSVIDGVIQPEGFLPWDKDLGLKTLYYAEFENTGPGSDTSGRVKWPGIKHIGAAEAEKFTPSKL |
Full Sequence |
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Protein Sequence Length: 562 Download |
MVVAVAVGVN NGPDKSEGGG DGHGGISTTS KSVKVLCAPS LYKETCESSL AKSGNNVTDP 60 KKMVQVGFEL AVESLNDAMK NSTTIKEVAE DPRAKRAVEI CEDLIETSID DMRRSLDELD 120 NFDMSKAYIH IDNLKTWLEA TITYQETCRD EFQNTTGPSG DKMRDILKLS GELTSNGLAM 180 VSGLSQILKT LHIPGAESRD DDENFGDSHR RLLGATAEED DAGAGGFPRW VTPMQRRLLA 240 ATPENVKPDI VVAKDGSGQF KSIMEAIKTI QKKHKVPIVM HVKAGVYNEQ VLIPKYVTGL 300 MMIGDGPTKT KVTGRKNFHE GTRTSDTATF AILAPGFIAK DMGFENTAGA EGHQAVAYRS 360 QSDNSVIYNC QFDGYQDTLY PQSNRQFYRD CVISGTIDFI FGVARAVLQN CTMIIRKPMA 420 NQACIVTAEG RKDPNGLSAI VIQNSRIKGD PAYVPVKDQN KGYLARPWKI YSRTVIMHSV 480 IDGVIQPEGF LPWDKDLGLK TLYYAEFENT GPGSDTSGRV KWPGIKHIGA AEAEKFTPSK 540 LFVEGDAWIT DSGVPYIRGM K* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02314 | PLN02314 | 1.0e-155 | 28 | 556 | 541 | + pectinesterase | ||
pfam01095 | Pectinesterase | 3.0e-173 | 249 | 546 | 299 | + Pectinesterase. | ||
PLN02745 | PLN02745 | 1.0e-174 | 13 | 555 | 547 | + Putative pectinesterase/pectinesterase inhibitor | ||
PLN02217 | PLN02217 | 0 | 26 | 560 | 535 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02990 | PLN02990 | 0 | 26 | 557 | 535 | + Probable pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI39537.1 | 0 | 26 | 560 | 52 | 574 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002279123.1 | 0 | 26 | 560 | 52 | 574 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002314364.1 | 0 | 24 | 560 | 51 | 568 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002512459.1 | 0 | 10 | 556 | 38 | 575 | Pectinesterase precursor, putative [Ricinus communis] |
RefSeq | XP_002516960.1 | 0 | 14 | 560 | 43 | 576 | Pectinesterase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 246 | 560 | 5 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 249 | 560 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 3e-17 | 251 | 542 | 7 | 334 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 3e-17 | 251 | 542 | 7 | 334 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 3e-17 | 251 | 542 | 7 | 334 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
JG079830 | 277 | 286 | 562 | 0 |
JG076690 | 264 | 286 | 549 | 0 |
JG074717 | 248 | 315 | 562 | 0 |
JG077563 | 251 | 312 | 562 | 0 |
JG079945 | 242 | 321 | 562 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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