y
Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si006114m |
Family | CE8 |
Protein Properties | Length: 596 Molecular Weight: 60712.4 Isoelectric Point: 5.8641 |
Chromosome | Chromosome/Scaffold: 4 Start: 3087460 End: 3091115 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 287 | 579 | 0 |
ITVAKDGTGNFRTVGEAVAAAPNNSRTRTVIRVKAGTYEENVEVPPYKTNIALVGDGRGATVITGSRSAGGGWTTFRTATFGVSGEGFLARDVTFRNTAG AAGGQAVALRVGADLAAFYRCGVEAHQDALYAHSFRQFYRECAVAGTVDAVFGDAAAVLQGCALLARAPLPGQFVVLTAQGRGDPNEDTGIALHNCTVSA AASMPAGTRTFLGRPWGAYARAVVMDSYLGQIVDREGWAEWPGAEPGRGDTVFFGEYGNGGPGADTEGRVGWAGVRQMDYDEAAQFAVENFIY |
Full Sequence |
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Protein Sequence Length: 596 Download |
MAAVSLSPPL LLLAVLLLTT AGTTQCHGHK RHHHHTDRTR RPNKAAAADA SPPADTAHHA 60 ICHKTPHPVS CLAAVASHPD AVAVASAKAV EASAVSVQLL PPNLLSVVLA SLRGAASALS 120 SLSPAISTLS APAGGASLRR GAAQDCQELH AGSLSSLSRS ASLLAAPGNE EGLPAVRAHL 180 AAALANKATC LDGLAGASSG PGVAGLLASL DGAYEHVSNS LALVARGAGG GLSVAGFANA 240 VAKVIHHRHL LQDDDDYDDN GDSGDDDSSS NGDGDGGNAD RPAVTVITVA KDGTGNFRTV 300 GEAVAAAPNN SRTRTVIRVK AGTYEENVEV PPYKTNIALV GDGRGATVIT GSRSAGGGWT 360 TFRTATFGVS GEGFLARDVT FRNTAGAAGG QAVALRVGAD LAAFYRCGVE AHQDALYAHS 420 FRQFYRECAV AGTVDAVFGD AAAVLQGCAL LARAPLPGQF VVLTAQGRGD PNEDTGIALH 480 NCTVSAAASM PAGTRTFLGR PWGAYARAVV MDSYLGQIVD REGWAEWPGA EPGRGDTVFF 540 GEYGNGGPGA DTEGRVGWAG VRQMDYDEAA QFAVENFIYG DEWLGATSFP YDDDV* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03043 | PLN03043 | 8.0e-122 | 287 | 591 | 312 | + Probable pectinesterase/pectinesterase inhibitor; Provisional | ||
PLN02314 | PLN02314 | 2.0e-124 | 287 | 593 | 309 | + pectinesterase | ||
PLN02713 | PLN02713 | 2.0e-127 | 285 | 591 | 313 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN02416 | PLN02416 | 1.0e-143 | 139 | 595 | 462 | + probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 2.0e-158 | 287 | 581 | 299 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAH56489.1 | 0 | 53 | 595 | 40 | 543 | pectin methylesterase 1 [Prunus persica] |
GenBank | EEE65248.1 | 0 | 53 | 595 | 52 | 550 | hypothetical protein OsJ_20428 [Oryza sativa Japonica Group] |
RefSeq | NP_001057041.1 | 0 | 53 | 595 | 52 | 585 | Os06g0193200 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002436630.1 | 0 | 1 | 595 | 1 | 606 | hypothetical protein SORBIDRAFT_10g006230 [Sorghum bicolor] |
RefSeq | XP_002516192.1 | 0 | 61 | 595 | 47 | 543 | Pectinesterase PPE8B precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 287 | 591 | 9 | 315 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 289 | 593 | 7 | 313 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 6e-21 | 297 | 550 | 18 | 311 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 6e-21 | 297 | 550 | 18 | 311 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 7e-21 | 297 | 550 | 18 | 311 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |