y
Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10013273m |
Family | CE8 |
Protein Properties | Length: 601 Molecular Weight: 65716 Isoelectric Point: 9.1463 |
Chromosome | Chromosome/Scaffold: 3 Start: 3417400 End: 3420705 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 284 | 579 | 0 |
VIVGPYKSDNFTTITDAIAAAPNNTRPEDGYFVIYVREGLYEEYIVVQMNKKNLMLIGDGINKTIITGNHNVVDGWTTYNCSSFAVIGERFMAVDITFRN TAGPEKHQAVALRNNAEGSSFYRCSFEGYQDTLYVHSMRQFYRECDIYGTIDFIFGNAAAIFQNCNIYPRKPMAKQKNAITAHGRIDPNQNTGISIINCT ITAAPDLAADPKSAMTFLGRPWKPYARTVFMQSYISDIVQPVGWLEWNGTTGLDTIYYGEYSNFGPGANTNQRVQWLGYNLLNMAEAMNFTVYNFT |
Full Sequence |
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Protein Sequence Length: 601 Download |
MKMQTLHFSS SLLLLSVIFL SWALLISTQH PPSQSPSLSP SLSPSKPPSQ PPTSPPSQSS 60 SLACKSTPYP KLCRTILNAV KSSPSDPYSY GKFTIKQCLK QASRLSKVIT GYARRVKSKP 120 GSATPEEIGA VADCGELSEL SVNYLQTVTT ELKTAQVMTA ALVEHVNSLL SGVVTNQQTC 180 LDGLAEAKSG FAAALGSPMG NLTRLYSISL GLVSHALNRN LKRFKASKGK ILGGGNSTYR 240 APLETLIKGL RKTCDNDKDC RKASRKLGEL GQTSGGSILV SKAVIVGPYK SDNFTTITDA 300 IAAAPNNTRP EDGYFVIYVR EGLYEEYIVV QMNKKNLMLI GDGINKTIIT GNHNVVDGWT 360 TYNCSSFAVI GERFMAVDIT FRNTAGPEKH QAVALRNNAE GSSFYRCSFE GYQDTLYVHS 420 MRQFYRECDI YGTIDFIFGN AAAIFQNCNI YPRKPMAKQK NAITAHGRID PNQNTGISII 480 NCTITAAPDL AADPKSAMTF LGRPWKPYAR TVFMQSYISD IVQPVGWLEW NGTTGLDTIY 540 YGEYSNFGPG ANTNQRVQWL GYNLLNMAEA MNFTVYNFTM GDTWLPQTDI PFYGGLLHKE 600 * 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02416 | PLN02416 | 2.0e-143 | 64 | 596 | 536 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02201 | PLN02201 | 3.0e-145 | 130 | 596 | 476 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN03043 | PLN03043 | 0 | 63 | 597 | 535 | + Probable pectinesterase/pectinesterase inhibitor; Provisional | ||
PLN02713 | PLN02713 | 0 | 63 | 597 | 543 | + Probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 284 | 582 | 300 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAF19577.1 | 0 | 3 | 600 | 1 | 617 | AC011708_20 putative pectinesterase [Arabidopsis thaliana] |
DDBJ | BAH20370.1 | 0 | 151 | 600 | 1 | 450 | AT3G10720 [Arabidopsis thaliana] |
RefSeq | NP_187683.2 | 0 | 1 | 600 | 1 | 619 | pectinesterase, putative [Arabidopsis thaliana] |
RefSeq | NP_196116.1 | 0 | 61 | 600 | 85 | 624 | pectinesterase, putative [Arabidopsis thaliana] |
RefSeq | XP_002315399.1 | 0 | 63 | 597 | 37 | 574 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 284 | 596 | 9 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 279 | 596 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 1e-24 | 294 | 586 | 18 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 1e-24 | 294 | 586 | 18 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 1e-24 | 294 | 586 | 18 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |