y
Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10000691m |
Family | CE8 |
Protein Properties | Length: 531 Molecular Weight: 59453.8 Isoelectric Point: 4.8524 |
Chromosome | Chromosome/Scaffold: 6 Start: 15672119 End: 15674680 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 220 | 515 | 0 |
LVVAQNGTGNYTTIGEALSAAPNSSETRFVIYIKCGVYLENIEIAREKTMIMFVGDGIGQTVIKANRSYADGWTAFHSATVGVRGSGFIAKDLSFVNDAG RTRYQAVALRSSSDHSAFYRCSFESYQDTIYAHSHKQFYRECDIYGTVDFIFGDASVVFQNCSLFARRPNPNQRIIYTAQGREDSRQPTGISIINSKILA APELIPVQANFKAYLGRPWQLFSRTVIMKSFIDDLIDPAGWLKWKGDFALETLFYGEYMNEGPGSNLTNRVQWPGFKRIETEEEAAEFSVGPFIEG |
Full Sequence |
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Protein Sequence Length: 531 Download |
MNNLMRKESK HIILNLMIFL LIFFLSTVSS SYSPHETQRF TTSSDDITDL VVAAINQTIS 60 KVNLSSSNFS YLLNRLGSSL SHRERCAFDD CLELLDDTVF DLTTAISELR SHSPEIHNVK 120 MFLSATLTNT RTCLDGFASN DEVEDENWNY NNNKTYGVAE SLKESLFNIS SHVKNSLAML 180 EDIPGNIPGK LEEDVAFPMW VSGSDRNLLQ DPVDESKVDL VVAQNGTGNY TTIGEALSAA 240 PNSSETRFVI YIKCGVYLEN IEIAREKTMI MFVGDGIGQT VIKANRSYAD GWTAFHSATV 300 GVRGSGFIAK DLSFVNDAGR TRYQAVALRS SSDHSAFYRC SFESYQDTIY AHSHKQFYRE 360 CDIYGTVDFI FGDASVVFQN CSLFARRPNP NQRIIYTAQG REDSRQPTGI SIINSKILAA 420 PELIPVQANF KAYLGRPWQL FSRTVIMKSF IDDLIDPAGW LKWKGDFALE TLFYGEYMNE 480 GPGSNLTNRV QWPGFKRIET EEEAAEFSVG PFIEGNKWLN STGIPYTLDI * 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02301 | PLN02301 | 9.0e-157 | 82 | 527 | 449 | + pectinesterase/pectinesterase inhibitor | ||
PLN02484 | PLN02484 | 5.0e-160 | 83 | 526 | 461 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02201 | PLN02201 | 2.0e-160 | 87 | 527 | 461 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02933 | PLN02933 | 0 | 1 | 530 | 537 | + Probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 219 | 516 | 298 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACJ68111.1 | 0 | 1 | 526 | 1 | 518 | pectinesterase [Brassica napus] |
RefSeq | NP_192139.1 | 0 | 29 | 528 | 36 | 530 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | NP_192141.1 | 0 | 32 | 530 | 23 | 518 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002301486.1 | 0 | 80 | 530 | 3 | 449 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523113.1 | 0 | 47 | 530 | 77 | 556 | Pectinesterase-3 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 219 | 530 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 221 | 526 | 6 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 5e-25 | 213 | 486 | 26 | 337 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 1e-22 | 230 | 508 | 18 | 329 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 1e-22 | 230 | 508 | 18 | 329 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |