y
Basic Information | |
---|---|
Species | Medicago truncatula |
Cazyme ID | Medtr1g083520.1 |
Family | CE8 |
Protein Properties | Length: 530 Molecular Weight: 58953.6 Isoelectric Point: 6.8511 |
Chromosome | Chromosome/Scaffold: 1 Start: 21678008 End: 21680186 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE8 | 214 | 513 | 0 |
VVVNPDGSGDFITINDAVDAAPTKTGNNGYHVIYVVAGIYSEYISIPKSKENLMIVGDGIGRTIITGNRSVVDGWTTFQSATFAVTGKGFVAVNITFRNT AGSNKHQAVAVRNGADMSVFYKCSFEGYQDTLYAHSLRQFYKNCDIYGTVDFIFGNAAAIFQNCNIHPRLPMQNQFNAITAQGRTDPNQNTGFSIWNCYI VAASELGGANNNYNDIKTYLGRPWKEYSRTIYMQSFIDGLIDPKGWMEWLGDFALSTLYYAEYANWGQGSNTSNRVTWKGYHQIDGKDADEFTVNKFIQG |
Full Sequence |
---|
Protein Sequence Length: 530 Download |
MKTSTTTIVS LFITLFISPS LASLISSPNN TCNLTPFPSF CLSILPSQYL SIDDQTIFFL 60 QQSLTITQNN IQSISSFFNQ STFPFSTLLV LQDCLNLAEL NTDFLSIVLQ ALETNTTMSS 120 NQANHLQTLL SAVLTNHQTC LDGFPEVNPF PKISTTLSNS LSDVNKLYKI TLQFFTLRRT 180 QTIIARLTNQ ITITTNNRKL LQTSVDNVMV RQKVVVNPDG SGDFITINDA VDAAPTKTGN 240 NGYHVIYVVA GIYSEYISIP KSKENLMIVG DGIGRTIITG NRSVVDGWTT FQSATFAVTG 300 KGFVAVNITF RNTAGSNKHQ AVAVRNGADM SVFYKCSFEG YQDTLYAHSL RQFYKNCDIY 360 GTVDFIFGNA AAIFQNCNIH PRLPMQNQFN AITAQGRTDP NQNTGFSIWN CYIVAASELG 420 GANNNYNDIK TYLGRPWKEY SRTIYMQSFI DGLIDPKGWM EWLGDFALST LYYAEYANWG 480 QGSNTSNRVT WKGYHQIDGK DADEFTVNKF IQGDMWLPMT GVPFRAGFQ* 540 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02468 | PLN02468 | 7.0e-153 | 32 | 528 | 513 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 3.0e-155 | 59 | 527 | 474 | + pectinesterase/pectinesterase inhibitor | ||
PLN02713 | PLN02713 | 0 | 32 | 529 | 530 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN03043 | PLN03043 | 0 | 32 | 527 | 536 | + Probable pectinesterase/pectinesterase inhibitor; Provisional | ||
pfam01095 | Pectinesterase | 0 | 214 | 514 | 302 | + Pectinesterase. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002302726.1 | 0 | 8 | 524 | 10 | 553 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002320332.1 | 0 | 27 | 528 | 35 | 559 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002330223.1 | 0 | 20 | 529 | 27 | 567 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002512461.1 | 0 | 18 | 528 | 21 | 565 | Pectinesterase-2 precursor, putative [Ricinus communis] |
RefSeq | XP_002523112.1 | 0 | 11 | 528 | 23 | 565 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 214 | 528 | 9 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 215 | 528 | 6 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 1e-20 | 224 | 518 | 18 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 1e-20 | 224 | 518 | 18 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 1e-20 | 224 | 518 | 18 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |