y
Basic Information | |
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Species | Arabidopsis thaliana |
Cazyme ID | AT4G02300.1 |
Family | CE8 |
Protein Properties | Length: 533 Molecular Weight: 59823.8 Isoelectric Point: 5.6921 |
Chromosome | Chromosome/Scaffold: 4 Start: 1009366 End: 1013034 |
Description | pectinesterase, putative, expressed |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 222 | 517 | 0 |
LSVAIDGTGNFTTINDAVFAAPNMSETRFIIYIKGGEYFENVELPKKKTMIMFIGDGIGKTVIKANRSRIDGWSTFQTPTVGVKGKGYIAKDISFVNSAG PAKAQAVAFRSGSDHSAFYRCEFDGYQDTLYVHSAKQFYRECDIYGTIDFIFGNAAVVFQNSSLYARKPNPGHKIAFTAQSRNQSDQPTGISILNCRILA APDLIPVKENFKAYLGRPWRKYSRTVIIKSFIDDLIHPAGWLEGKKDFALETLYYGEYMNEGPGANMAKRVTWPGFRRIENQTEATQFTVGPFIDG |
Full Sequence |
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Protein Sequence Length: 533 Download |
MINNHPIREK PKHIIFNLLS LIFFLIFLST VVSSQSPSYT THKTQRLTET KTIPELIIAD 60 LNLTILKVNL ASSNFSDLQT RLFPNLTHYE RCAFEDCLGL LDDTISDLET AVSDLRSSSL 120 EFNDISMLLT NVMTYQDTCL DGFSTSDNEN NNDMTYELPE NLKEIILDIS NNLSNSLHML 180 QVISRKKPSP KSSEVDVEYP SWLSENDQRL LEAPVQETNY NLSVAIDGTG NFTTINDAVF 240 AAPNMSETRF IIYIKGGEYF ENVELPKKKT MIMFIGDGIG KTVIKANRSR IDGWSTFQTP 300 TVGVKGKGYI AKDISFVNSA GPAKAQAVAF RSGSDHSAFY RCEFDGYQDT LYVHSAKQFY 360 RECDIYGTID FIFGNAAVVF QNSSLYARKP NPGHKIAFTA QSRNQSDQPT GISILNCRIL 420 AAPDLIPVKE NFKAYLGRPW RKYSRTVIIK SFIDDLIHPA GWLEGKKDFA LETLYYGEYM 480 NEGPGANMAK RVTWPGFRRI ENQTEATQFT VGPFIDGSTW LNSTGIPFSL GF* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02201 | PLN02201 | 6.0e-152 | 93 | 531 | 459 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 1.0e-154 | 31 | 531 | 502 | + pectinesterase/pectinesterase inhibitor | ||
PLN02484 | PLN02484 | 1.0e-162 | 55 | 531 | 489 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02933 | PLN02933 | 0 | 3 | 532 | 530 | + Probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 221 | 518 | 298 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0009505 | plant-type cell wall |
GO:0012505 | endomembrane system |
GO:0030599 | pectinesterase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACJ68111.1 | 0 | 4 | 528 | 2 | 518 | pectinesterase [Brassica napus] |
RefSeq | NP_192139.1 | 0 | 1 | 532 | 1 | 532 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | NP_192141.1 | 0 | 39 | 530 | 23 | 516 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002301486.1 | 0 | 90 | 530 | 7 | 447 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523113.1 | 0 | 51 | 532 | 75 | 556 | Pectinesterase-3 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 221 | 532 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 221 | 532 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 3e-21 | 218 | 510 | 2 | 329 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 3e-21 | 218 | 510 | 2 | 329 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 3e-21 | 218 | 510 | 2 | 329 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |