y
Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10002644m |
Family | CE8 |
Protein Properties | Length: 531 Molecular Weight: 59312.1 Isoelectric Point: 6.125 |
Chromosome | Chromosome/Scaffold: 6 Start: 15675228 End: 15677422 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 220 | 515 | 0 |
LSVAKDGTGNFTTISDAVYAAPNSSETRFIIYIKGGEYIENVELRKKKTMIMFVGDGIGITVIKANRSRVDGWSTFQTATVGVKGKGFIAKDISFVNFAG LAKGQAVALRSGSDLSAFYRCEFDGYQDTLYVHSARQFYRECDIYGTVDFIFGNAAVVFQNCSLYARRPNPNQKIAFTAQSRNQTDQPTGISIIQCRILA APDLVPVKHSFKAYFGRPWRKYSRTVILKSYIDDLIHPAGWLEWNDSFALETLYYGEYMNEGPGANMTERVKWSSFRRIENETVATQFTVGPFIDG |
Full Sequence |
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Protein Sequence Length: 531 Download |
MNPPFRKKQI HIVFHLLPLN YLLIFLSTVV PSYSPSYTTQ ETQGLTETKI TPELVIATLN 60 LTISKVRLSS SNFSDLQNRV GPILTHGERC AFEDCLGLLD DTISDLQATL SNLRSSSLKS 120 HDVNMLLTNA MTNQDTCLDG FSTSGDGDNI AMTFELPQNL KENILNISNN LSNSLDMLQV 180 MWRKNPSSES SEVDVEYPSW VSELDQRVLQ APVQETSFNL SVAKDGTGNF TTISDAVYAA 240 PNSSETRFII YIKGGEYIEN VELRKKKTMI MFVGDGIGIT VIKANRSRVD GWSTFQTATV 300 GVKGKGFIAK DISFVNFAGL AKGQAVALRS GSDLSAFYRC EFDGYQDTLY VHSARQFYRE 360 CDIYGTVDFI FGNAAVVFQN CSLYARRPNP NQKIAFTAQS RNQTDQPTGI SIIQCRILAA 420 PDLVPVKHSF KAYFGRPWRK YSRTVILKSY IDDLIHPAGW LEWNDSFALE TLYYGEYMNE 480 GPGANMTERV KWSSFRRIEN ETVATQFTVG PFIDGHTWLN STGIPFTLGF * 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02301 | PLN02301 | 1.0e-156 | 6 | 529 | 545 | + pectinesterase/pectinesterase inhibitor | ||
PLN02201 | PLN02201 | 6.0e-161 | 21 | 529 | 521 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02484 | PLN02484 | 2.0e-166 | 53 | 529 | 485 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02933 | PLN02933 | 0 | 1 | 530 | 530 | + Probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 219 | 515 | 297 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACJ68111.1 | 0 | 1 | 526 | 1 | 518 | pectinesterase [Brassica napus] |
RefSeq | NP_192139.1 | 0 | 2 | 530 | 4 | 532 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | NP_192141.1 | 0 | 37 | 528 | 23 | 516 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002301486.1 | 0 | 79 | 528 | 2 | 447 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523113.1 | 0 | 53 | 530 | 79 | 556 | Pectinesterase-3 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 219 | 530 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 219 | 530 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 2e-23 | 216 | 508 | 2 | 329 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 2e-23 | 216 | 508 | 2 | 329 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 2e-23 | 216 | 508 | 2 | 329 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |