y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.006G134600.1 |
Family | CE8 |
Protein Properties | Length: 542 Molecular Weight: 60064.4 Isoelectric Point: 4.8467 |
Chromosome | Chromosome/Scaffold: 06 Start: 11106077 End: 11108364 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 228 | 523 | 0 |
LIVAADGTGNFSTITDAINFAPNNSYDRIIIRVREGVYAENVEIPIYKTNIVLLGDGTDVTFITGNRSVVDGWTTFRSATLAVSGDGFLALDITIDNTAG PEKHQAVALRVSADLVALYRCSINGYQDTLYVHSFRQFYRECDISGTIDYLFGNAAVVFQACNIISRKPLPNQFTVITAQSKETPDEYTGISIQNCSILA TEDLYSNSNTVKSYLGRPWKVYSTTVVLESYIDDFINPEGWSKWSNDDDQGLDTLYYGEYENYGPGSGTENRVTWAGYHVMDDIDAYNFTVSYFIT |
Full Sequence |
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Protein Sequence Length: 542 Download |
MAFSILKLLL LLISSVFFTS TWALNTSSTT SLDAHLSTIR TFCNSRPYPD ACFNSLKLSI 60 SINISPNIIN LLLQTLQTAI SEAGKLTNLF SIAGGSNIIE RQRGTIQDCL ELHQITVSSL 120 QRSVSRVRAG DSRKLVDARA YLSAAVTNKN TCLEGLDSAS GPLKPALLNS LTSTYQHVTN 180 SLSMLPKSKH SKQGYKNRRL LGFPKWMSKK DRRILQSDED EYDPSEELIV AADGTGNFST 240 ITDAINFAPN NSYDRIIIRV REGVYAENVE IPIYKTNIVL LGDGTDVTFI TGNRSVVDGW 300 TTFRSATLAV SGDGFLALDI TIDNTAGPEK HQAVALRVSA DLVALYRCSI NGYQDTLYVH 360 SFRQFYRECD ISGTIDYLFG NAAVVFQACN IISRKPLPNQ FTVITAQSKE TPDEYTGISI 420 QNCSILATED LYSNSNTVKS YLGRPWKVYS TTVVLESYID DFINPEGWSK WSNDDDQGLD 480 TLYYGEYENY GPGSGTENRV TWAGYHVMDD IDAYNFTVSY FITGDEWLDS TSIPYYDGIQ 540 S* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02301 | PLN02301 | 4.0e-156 | 101 | 539 | 440 | + pectinesterase/pectinesterase inhibitor | ||
PLN02201 | PLN02201 | 8.0e-162 | 137 | 541 | 415 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02713 | PLN02713 | 1.0e-164 | 16 | 541 | 567 | + Probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 3.0e-180 | 229 | 525 | 298 | + Pectinesterase. | ||
PLN02416 | PLN02416 | 0 | 16 | 539 | 526 | + probable pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAH56489.1 | 0 | 1 | 539 | 1 | 543 | pectin methylesterase 1 [Prunus persica] |
RefSeq | NP_180212.1 | 0 | 31 | 539 | 29 | 547 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002273535.1 | 0 | 1 | 539 | 1 | 529 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002326320.1 | 0 | 1 | 541 | 1 | 541 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002516192.1 | 0 | 32 | 539 | 37 | 543 | Pectinesterase PPE8B precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 229 | 539 | 6 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 228 | 539 | 9 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1qjv_B | 7e-24 | 238 | 494 | 18 | 311 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 7e-24 | 238 | 494 | 18 | 311 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 8e-24 | 238 | 494 | 18 | 311 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |