y
Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 341207 |
Family | CE8 |
Protein Properties | Length: 562 Molecular Weight: 61979.9 Isoelectric Point: 9.6453 |
Chromosome | Chromosome/Scaffold: 3 Start: 4296161 End: 4298108 |
Description | root hair specific 12 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 255 | 546 | 0 |
DIVVAKDGSGKYRTISRALEDVPEKSEKRTIIYVKKGVYFENVKVEKKMWNVVVVGDGESKSIVSGRLNVIDGTPTFKTATFAVFGKGFMARDMGFINTA GPSKHQAVALMVSADLAAFYRCTMNAYQDTLYVHAQRQFYRDCTIMGTVDFIFGNSASVLQNCRILPRRPMKGQQNTITAQGRTDPNMNTGISIHRCNIS PLGDLTDVKTFLGRPWKNFSTTVIMDSYLHGFVDRKGWLPWTGDSAPDTIFYGEYKNTGAGASTKNRVKWKGLRFLYTKEANRFTVKPFIDG |
Full Sequence |
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Protein Sequence Length: 562 Download |
MSSPYGKVDE HEHVRLQARR KTRKNIAIIA VSLVILAGIV IGAVFGTMAH KKSSETVETN 60 NNGDSISVSV KAVCDVTLHK DKCFETLGSA PNASSLNPEE LFKYAVKITI TEVSKALNAF 120 SSSLGDEKNN ITMNACAELL DLTIDNLNNT LTSSANGGVT VPELVDDLRT WLSSAETYQE 180 TCVETLAPDM KPFGESHLKN STELTSNALA IITWLGKIAD SFKLRRRLLT TVDVEVDVHA 240 GRRLLQSTDL RKVADIVVAK DGSGKYRTIS RALEDVPEKS EKRTIIYVKK GVYFENVKVE 300 KKMWNVVVVG DGESKSIVSG RLNVIDGTPT FKTATFAVFG KGFMARDMGF INTAGPSKHQ 360 AVALMVSADL AAFYRCTMNA YQDTLYVHAQ RQFYRDCTIM GTVDFIFGNS ASVLQNCRIL 420 PRRPMKGQQN TITAQGRTDP NMNTGISIHR CNISPLGDLT DVKTFLGRPW KNFSTTVIMD 480 SYLHGFVDRK GWLPWTGDSA PDTIFYGEYK NTGAGASTKN RVKWKGLRFL YTKEANRFTV 540 KPFIDGGRWL PATKVPYRSG L* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02301 | PLN02301 | 1.0e-145 | 167 | 561 | 402 | + pectinesterase/pectinesterase inhibitor | ||
PLN02745 | PLN02745 | 6.0e-156 | 12 | 561 | 592 | + Putative pectinesterase/pectinesterase inhibitor | ||
PLN02468 | PLN02468 | 0 | 2 | 561 | 569 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02314 | PLN02314 | 0 | 5 | 561 | 584 | + pectinesterase | ||
pfam01095 | Pectinesterase | 0 | 255 | 546 | 297 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 255 | 561 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 253 | 561 | 2 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 3e-18 | 257 | 551 | 7 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 3e-18 | 257 | 551 | 7 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 3e-18 | 257 | 551 | 7 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |