y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.010G247700.1 |
Family | CE8 |
Protein Properties | Length: 575 Molecular Weight: 64085.4 Isoelectric Point: 6.726 |
Chromosome | Chromosome/Scaffold: 10 Start: 22134525 End: 22138609 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 256 | 556 | 0 |
VIVGPYGTDNFTTIGDAIAFAPNNSKPEDGYFVIFVREGIYEEYVVVPKNKKNIVLIGEGINQTVITGNHSVIDGWTTFNSSTFAVSGERFVGIDMTFRN TAGPEKHQAVALRNNADLSTFYRCSFEAYQDTLYVHSLRQFYRECDVYGTVDFIFGNAAAVFQNCNLYARKPMLNQKNAFTAQGRTDPNQNTGISIHNCT IEAAPDLAMDRNSTDSNLTLNFLGRPWKEYSRTVIMQSYIGELIQPVGWLEWNGTVGLDTIYYGEFQNYGPGANTSRRVQWPGFNLMNATQAVNFTVYNF T |
Full Sequence |
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Protein Sequence Length: 575 Download |
MQRPLSFLIL LFAFLSIFSP LLISSQSPPP PYSPSNACKS TLYPKLCRSI LTTFPSSSNP 60 YEYSKFSVKQ CLKQAKRLSK VIDYHLTHEK QLSKMTHEEF GALQDCHEFM ELNVDYFETI 120 SSELVAAESM SDVLVERVTS LLSGVVTNQQ TCYDGLVQSK SSIVSALSVP LSNVTQLYSV 180 SLALVTHSLE KNLKKNKRRK GSPQGTGTRG VREPLETLIK ALRKTSSCHE TRNCHRGERI 240 LSDDAGDDGI LVNDTVIVGP YGTDNFTTIG DAIAFAPNNS KPEDGYFVIF VREGIYEEYV 300 VVPKNKKNIV LIGEGINQTV ITGNHSVIDG WTTFNSSTFA VSGERFVGID MTFRNTAGPE 360 KHQAVALRNN ADLSTFYRCS FEAYQDTLYV HSLRQFYREC DVYGTVDFIF GNAAAVFQNC 420 NLYARKPMLN QKNAFTAQGR TDPNQNTGIS IHNCTIEAAP DLAMDRNSTD SNLTLNFLGR 480 PWKEYSRTVI MQSYIGELIQ PVGWLEWNGT VGLDTIYYGE FQNYGPGANT SRRVQWPGFN 540 LMNATQAVNF TVYNFTMGDT WLPYTDVPFS GGLV* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02468 | PLN02468 | 1.0e-150 | 38 | 573 | 539 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02201 | PLN02201 | 1.0e-150 | 142 | 574 | 434 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN03043 | PLN03043 | 0 | 36 | 574 | 542 | + Probable pectinesterase/pectinesterase inhibitor; Provisional | ||
PLN02713 | PLN02713 | 0 | 36 | 574 | 550 | + Probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 256 | 559 | 305 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI29156.1 | 0 | 30 | 574 | 28 | 567 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002273427.1 | 0 | 30 | 574 | 28 | 571 | PREDICTED: similar to pectinesterase, putative [Vitis vinifera] |
RefSeq | XP_002310960.1 | 0 | 33 | 574 | 1 | 543 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002315399.1 | 0 | 25 | 574 | 25 | 574 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515774.1 | 0 | 37 | 574 | 35 | 568 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 252 | 573 | 5 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 257 | 573 | 6 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 2e-24 | 266 | 563 | 18 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 2e-24 | 266 | 563 | 18 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 2e-24 | 266 | 563 | 18 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |